Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0537 ATGAAGCTTAGACTCAGATCTTTGGAATCGAAAGAAACCCTAAAAATCGAAGTCCCCAATTCCTGTTCTCTGCAGCAACTCAAAGACACCATTTCTCACACcatctcttcttatttttcttcctcttcctcttctctgCATCTCTCCCTCAACAGAAAGGACGAAATCCACGCCTCTTCGCCGCACGAGTCCCTCCTCGCCCTCGGCGTCGCCGCCGGCGACCTCGTCTTCTACTCTCTCAAGCCCTCCGCCTTCTCCCTCGAAACCCTCCCCCACAAACCCAGCCCGCAAGAAGAAACTGGTTCCGGCGACCGACCCACCACCCAAAACTATCCGGAGATCCTCGCCGGCGACGCCCTCTCGATTCCCGCCGCGGAAAAGCCTCCGACTTTGGACACAGCAGAAGCGGAAACCGCGGAAATGGTTGATGGGTCTGacgaggtggtggtggtgagtaCCAATTCAGAGCCTTTCTTTGTGAGAAGGGTTCTAAAAGAAGCGCTTGGAAACAACGTTAGTGATTTCAAGTTGTTAGTGTTTACGGTTCATGGTGTTGTTCTTGAATCTGGGTTTGTCCTAGTGGATCCTGATTCGGGTATGGCGGTTAATTGTTCTCACCTTCTTGATGATTCTTCTTCAGCGTTTTCTTCGGTGGTATCTTTGAGGTATACCCTACCTGAGATTCTGACTAATGGTGCTTCTCATAGTGTGAATTTGAAATTGCAGACATTGGGGCATTTTGTGAATGTTTGTGGGTCGTTATCTGATGATGTTGGGTCGAGGTTGCATTgtgtttgtttggataaacGTAAATGTGCTAGGCCATTAGAGTTAATGCTGGCAAATTCTGAATCTGAGACCAGTGTTAATGATATGGGAGATTTTCAGTTTGGAAATGAAGTTTTTGAACTGTGGAAGATGGTGAAAGATAGGCTTGCATTGCCATTGTTAATTGATCTTTGTGAGAAGGCTGGATTGGATCTCCCACCTTGTTTCATGCGACTACCAATGGAGCTTAAGCTCTTGATTTTGGAGCGTCTTCCCGGTCTTGATTTGGCCAAAGTGGCTTGCACCTGTTCGGAATTGCGATACTTGTCCTCCAGCAATGAGTTGTGGAAGAAGAAGTATGAGGAAGAGTTTGGAAAAGGAGAGTATAGAGGGTGGCTTTTTAAGGATTCGTTTGCTGTGTCCTGGAAAACAAAGAAGAGGTCGCAAGGGATTCCTTATCGTGGTATTTCAAGAGCCATTATTCTCCAACCCAACCCTTTTCCAATGTCTCCAATTTGGGGTGGAGAATATGGTGTGCAGCCAGTCGCTGGTGTAGCATTCCCTAGATACCCTCCAAGGCGGATTGTCATTCCTGTGTGTCGTTTGCCGTATTTCAATCCATAA 1392 0.4483 MKLRLRSLESKETLKIEVPNSCSLQQLKDTISHTISSYFSSSSSSLHLSLNRKDEIHASSPHESLLALGVAAGDLVFYSLKPSAFSLETLPHKPSPQEETGSGDRPTTQNYPEILAGDALSIPAAEKPPTLDTAEAETAEMVDGSDEVVVVSTNSEPFFVRRVLKEALGNNVSDFKLLVFTVHGVVLESGFVLVDPDSGMAVNCSHLLDDSSSAFSSVVSLRYTLPEILTNGASHSVNLKLQTLGHFVNVCGSLSDDVGSRLHCVCLDKRKCARPLELMLANSESETSVNDMGDFQFGNEVFELWKMVKDRLALPLLIDLCEKAGLDLPPCFMRLPMELKLLILERLPGLDLAKVACTCSELRYLSSSNELWKKKYEEEFGKGEYRGWLFKDSFAVSWKTKKRSQGIPYRGISRAIILQPNPFPMSPIWGGEYGVQPVAGVAFPRYPPRRIVIPVCRLPYFNP 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0537 463 SMART fbox_2 335 375 IPR001810 GO:0005515
Ssu7g0537 463 MobiDBLite consensus disorder prediction 88 110 - -
Ssu7g0537 463 SUPERFAMILY F-box domain 329 390 IPR036047 GO:0005515
Ssu7g0537 463 ProSiteProfiles F-box domain profile. 329 375 IPR001810 GO:0005515
Ssu7g0537 463 PANTHER F-BOX PROTEIN SKIP22 1 457 - -
Ssu7g0537 463 Pfam F-box-like 334 376 IPR001810 GO:0005515
Ssu7g0537 463 Gene3D - 157 331 - -
Ssu7g0537 463 Gene3D - 332 406 - -
Ssu7g0537 463 PANTHER F-BOX PROTEIN SKIP22 1 457 - -
Ssu7g0537 463 MobiDBLite consensus disorder prediction 93 109 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0537 K10293 - gmx:100796338 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0537 7 9870123 9871514 Ssu7g0537 7 9870123 9871514 ECH