Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0516 ATGGTGGTCTGCAAATGTCGCAAGGCTACTAAGTTATATTGCTTCGTGCACAAAGTTCCTGTCTGTGGGGAATGTATCTGCTTCCCGGAGCACCAAATCTGcgtgGTCCGGACTTATTCAGAATGGGTTATAGATGGGGAGTATGATTGGCCCCCAAAATGCTGCCAATGCCAGGCTGTTTTAGAAGAGGGTGATGGATCTCAAACAACTCGACTGGGTTGCTTGCaTGTTATCCACACAAATTGCTTGGTCTCGCATATCAAGAGTTTTCCTCCACATACTGCCCCAGCAGGATATGTGTGTCCTTCATGCTCTACTCCGATATGGCCTCCCAAAAGTGTGAAAGATTCAGGATCACGTCTTCATTCCAAGTTGAAGGAAGCTATCATGCAGTCTGGTAtggaaaagaatatttttggaAATCATCCAGTTTCATTGTCAGTGACAGAATCACGAAGTCCTCCACCTGCTTTTGCTTCAGATCCATTAATTAGTAGGGAAATTCATGGAAATTCAGACTCAGTTGATGGATACTCACCTGCAACTGGGTCAGAACCGCCAAAACTTTCAGTGGCAGATATTGTGGAGATAGATGGTGCTAATTCAGCaggaaatttcttgaaaaactcAAGTCCTGTTGGTCCTGGTGCCACCACAAGGAAGGGCTCAGTCCATGTTGAACGACAGAATTCTGAAATTTCTTACTATGCTGATGATGAAGACGGGAATAGTAAAAAATACTCAAAACGAGGTCCATTCCACCATAAGTTTCTTAGAGCTTTGCTTCCTTTCTGGTCCACTGCTTTACCTACTCTACCAGTGACTGCACCTCCAAGGAAAGATGTATCAAATGTGCCTGAAACCTCAGAAGGCCGTACACGGCATCAAAGATCATCAAGGATGGACCCAAGAAAAATTCTTCTCCTGATTGCAATTATGGCTTGCATGGCAACTATGGGTATATTGTATTACAGACTAGTGCAACGGGGTCCAGGGGAAGAGCATCTTAATGATGAATAA 1020 0.4265 MVVCKCRKATKLYCFVHKVPVCGECICFPEHQICVVRTYSEWVIDGEYDWPPKCCQCQAVLEEGDGSQTTRLGCLHVIHTNCLVSHIKSFPPHTAPAGYVCPSCSTPIWPPKSVKDSGSRLHSKLKEAIMQSGMEKNIFGNHPVSLSVTESRSPPPAFASDPLISREIHGNSDSVDGYSPATGSEPPKLSVADIVEIDGANSAGNFLKNSSPVGPGATTRKGSVHVERQNSEISYYADDEDGNSKKYSKRGPFHHKFLRALLPFWSTALPTLPVTAPPRKDVSNVPETSEGRTRHQRSSRMDPRKILLLIAIMACMATMGILYYRLVQRGPGEEHLNDE 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0516 339 MobiDBLite consensus disorder prediction 273 300 - -
Ssu7g0516 339 ProSiteProfiles Zinc finger RING-type profile. 54 105 IPR001841 -
Ssu7g0516 339 MobiDBLite consensus disorder prediction 285 300 - -
Ssu7g0516 339 MobiDBLite consensus disorder prediction 203 225 - -
Ssu7g0516 339 PANTHER ZINC FINGER PROTEIN-LIKE 1 1 338 IPR039043 -
Ssu7g0516 339 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 47 143 IPR013083 -
Ssu7g0516 339 MobiDBLite consensus disorder prediction 203 217 - -
Ssu7g0516 339 SUPERFAMILY RING/U-box 53 111 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0516 - - gmx:100805734 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0516 7 9515805 9519853 Ssu7g0516 7 9515805 9519853 ECH