Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0506 ATGACAATACCCAAGCAAAGCTATTCTCGAATTGACACATTGGAGCTGAAAGCTCTGATTGTTCGAAAGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAGCTTCGAAGATTATTGAGTTTAAAGATAAGCAAGTCAGAGTTTGACAGGATTTGCATCATGATAATTGGCAGGGAAAATATTCCTCTTCACAATCGACTCATTAGAGCGATTCTGAAGAACGCTTGTCTGGCTAAAGTCCCACCTGTGAGAGGCTCTGCAAGAGTAGGGAGTGCCTTAAGTGTAAAAGATTCAAATGGGTTGCAGGGAGGCTCTATTCAAACGATGTTTGGGGATGTGTTTCCTCCTTCAATGCGGAGGATTGGCTCTTTGGCTGCTCGAGACCGTAGGTTTAAGGGCCGCCAATTTGGTCTCCCGTCTGAAGAATTGATATATAAGACACTGGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGTAGACCTCCGATTTCTGTTGAAGAAGGAGAGGAGGTTGAACAGATGGCTGCAAGCCCCAGCATTCAAAGTAGGAGCCCAGTTACAGCTCCTCTTGGTATATCCATGAATTTTGGTTGTGGTCGTAGACGGCATTCTAATGTATCATTACATAGCAAAGATTATCCAGAGACCTGTCACAGCAACGGAGATCTCCCTGACACTAGATCTTTGAGGAGTCGTTTGGAGCAAAAGCTCGAGAGTGAGGGTTTAACTGTGACAATGGATTGTGTAAATCTATTGAATAATGCACTGGATTCGTATCTGAAGAGGTTGATTGAATCCTTTATGGATTTAGCTGGGTCAAGATCTGGAAATGAGCAGCACCTAAGACAACAAAACAGACAGTTGGTAACCAGTTCAAATGTATTGCTACCTGGAAGATGTATGCAGACAGCAACAAGATCTGCTGGTGCATCTGTGTTAGATTTTCGTCTTGCAATGGAGTTAAATCCACAAGTTCTTGGACCAGATTGGCCAATACAACTTGAGAAGATTTGCATACGTGCCTCTGAAGAGTGA 1044 0.4368 MTIPKQSYSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSLKISKSEFDRICIMIIGRENIPLHNRLIRAILKNACLAKVPPVRGSARVGSALSVKDSNGLQGGSIQTMFGDVFPPSMRRIGSLAARDRRFKGRQFGLPSEELIYKTLEQQSATELNSLGSRPPISVEEGEEVEQMAASPSIQSRSPVTAPLGISMNFGCGRRRHSNVSLHSKDYPETCHSNGDLPDTRSLRSRLEQKLESEGLTVTMDCVNLLNNALDSYLKRLIESFMDLAGSRSGNEQHLRQQNRQLVTSSNVLLPGRCMQTATRSAGASVLDFRLAMELNPQVLGPDWPIQLEKICIRASEE 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0506 347 PANTHER TRANSCRIPTIONAL REGULATOR OF RNA POLII, SAGA, SUBUNIT 5 347 - -
Ssu7g0506 347 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 273 IPR024738 GO:0070461
Ssu7g0506 347 PANTHER TRANSCRIPTIONAL ADAPTER 1 5 347 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0506 Ssu-Chr7 9401202 9402245 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0506 - - gmx:100817344 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0506 7 9401202 9402245 Ssu7g0506 7 9401202 9402245 ECH