Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0505 ATGAACCCTGCCAAGCGTTCCCATGTCATGATGCAGAGGCAGTTGATGTTGGTGAACCGTGTCATTGATCCAATAAAAACCCCTTCGTTTCTCCGCAACAAGGTGCACTCTAAACCTTATTTTCGCTCGCCACATTTCCTGAGGAAACCCAGAGACAGAGAATATGAAATCTCTTCATCTTTGTTCTcttcatctttttgttcttcttcttcttcttcatcatctgCTACTGCAACCTCCCTCTCCAAGGTTGGCTTTGTGGGTTGGTATTTGGGGATGATCAAGTCGTggccaattttgacaaaaagtgTTACTTCTTCACTTATTTACATCGCTGCTGATTTATCCTCCCAGACTATTGTGCAGGAATCTTCAGAACCTTTTGATTTTATAAGGACTTTACGCATGGCAGGATATGGGATGGTCATTTTAGGACCATCATTGCATTTCTGGTTCAATTTTGTATCAAAGCTTTTCCCAAGGAGGGATCTTTTCTCTACATTGAAGAAAATGGTCATGGGTCAGACACTTTATGGGCCTGCCATGActgttattttcttctccttgaATGCACGTTTGCAGGGTGAAACCGGCTCAGAGATTGTTGCACGCTTAAAACGTGATTTGCTTCCTACGATGTTAAATGGGATTATGTACTGGCCTATATgtgattttataacttttagGTTCATTCCCGTCCATTTACAGCCATTAGTCAGCAATTCCTTTTCGTACTTGTGGACCGTTTATATGACCTATATGGCAAGCCTAGAGAAAGCAACCTGA 786 0.3766 MNPAKRSHVMMQRQLMLVNRVIDPIKTPSFLRNKVHSKPYFRSPHFLRKPRDREYEISSSLFSSSFCSSSSSSSSATATSLSKVGFVGWYLGMIKSWPILTKSVTSSLIYIAADLSSQTIVQESSEPFDFIRTLRMAGYGMVILGPSLHFWFNFVSKLFPRRDLFSTLKKMVMGQTLYGPAMTVIFFSLNARLQGETGSEIVARLKRDLLPTMLNGIMYWPICDFITFRFIPVHLQPLVSNSFSYLWTVYMTYMASLEKAT 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0505 261 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 6 260 IPR007248 GO:0016021
Ssu7g0505 261 Pfam Mpv17 / PMP22 family 193 251 IPR007248 GO:0016021
Ssu7g0505 261 PANTHER OS12G0508100 PROTEIN 6 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0505 Ssu-Chr7 9394985 9399277 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0505 36 259 Miscellaneous Gene Families AT2G14860 64.732 6.41e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0505 K13348 - gmx:100816797 414.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0505 7 9394985 9399277 Ssu7g0505 7 9394985 9399277 ECH