Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0491 ATGGGCATGGCCATCGACATCCAAACCTTGGAAGACAGGTATCTTGATTCTTGCAGGAGACATGGTGTTTTGCCTAATTCTTCTATTTTGTCAAGCCTTTTCAAGTCTGAGGTCAAAAAGTCCAACCATGAGCTGTGCAGCCTGGAGATTTTAATTGATGACCTAAAGGATGTTGATATTGCTCCACTTCTTGACTTGTGCATGAACCTTGATACTTCTGAAATAGAAGTTGTTGATGTACGTAATGAATCATCATGTGTATTAAATGGAGAATATGCATTATCATTGATGCGTGCTATTAATCAAAAGCTTCGAGTAGTCCATCTACAGGATCTGTCATTTGGAAAAGACTTCTTACGGGATATCTCACAAAGAGGTTTGGCATGCCAAGTTTTGACATTGAGGTGTTCACGTTTCCGAAAGCTGAACTTAACAGGGGAGTTCATGCATATGCACACCCTAAATCTTGATTTCAGTTCTTCCCTTACCTGTTTCCAGGAGGGCTGTTTTAATTGTATGCCCAATCTAATGCGTCTCTCAATGTGTGATACACGGATTACAAATCTTTGGACAACTGTTGCAGCTCTCTCTAAGCTTCCTTCTTTGATTGAATTAAGGTTTCAATATTGGCAGTATTGCAATGATGCTGGGACATCTTTTATCTCGTCCAGTGGGAAGTCAGATGGCACTGCTGATTTTAGCCTGCTTGATAGAGTTCCTTTTATTGGTGAATCCTACACTGATACAACAGAACTGACAGATCCCAACTTTAGTGCTGAAGATCCACTAAgaaatttttattcctttgaTGAAGAAGTTATAAATCATGATGTTCAAAGCATGGTTGAGGATTCATCAGATGATAGTGAAGTTGACTTTACTAGTCGACAACATAGATACTGGTTGTCAGATGTTTTTCCTGGGTGGAATTCAGAAGTGCCTCTTCAGAATGAGAATGAAGATGGAGAAGAGTCATTGCAAGGTGCTTTTACAGAGCGTATTGCTGATGTGTCTATGAAGTATATGTCTCGTCATGCATCGCCAATATGCTATGAGAAACATTACAGAGAGTTCATGATAGCTTCATTACCGAATCtgaaaaatttagataatatgCCAATCAGAAAGATTGACAAGGAAAGGGCTACTGGAATATTTTCTCAATACTTTGAATATCTTCCATATAAATGGAAGCACAAAGAGAGTGTTGTAAGTATCTTacagaagagagaaataaaatcagGTCACCATAAGGTGCAATCTTCTAAGCTGAGGCCATCATATCCGTCTGGAAAGTcccaatatttttatactagGTCTCTTTCTGCTGCTAAATTGGGGTCTTCAACCTGGCCTTTCTTGCATCCCCTTTCTCTGTTAGGATGTGAATTGGACAAGGGCTTTCATCCAAGGCAGTTTGAGTACCATCCATCTGACTCCAGTTTGATGGTCTTTGGAACTTTAGATGGTGAAGTAGTTGTCATTAACCATGAGAATGAACATATTGTAAGTTATATCCCGTCACTTGGAGCAATGAATAGTGTTTTGGGTCTCTGTTGGCTCAAAAAATATCCCTCTAAGCTTATAGCAGGTTCAGACAATGGTTCCTTGAAATTGTATGACATCCACCAAATACCAAGAAAAGTTACAGGCATACGTGGGAATTGTGGTTGTGTTACCTTTGATGAATTTGACCAGTTGACATCTGTTCATGTTAACTCTGCGGATGAACTATTTCTTGCAAGTGGTTACTCAAGAAATGTTGCTTTATATGACATCAACAGTGGCAAGCGCTTACAAGTATTCACAGATATGCATCGTGGGCATATTAATGTAGTAAAATTTGCTAATCATTCCCCATCAATTTTTGCCACTTCATCATTTGATCACGATGTCAAGATGTGGGACTTGAGACAAAAACCAATACACCCATGCTTCACTGTTTCAAGCTCTAGAGGAAATGTGATGGTTTGCTTTTCTCCAGATGATCAATATATTCTTGCATCAGCTGTTGATAATGAGGTTAGACAATTTCTGGCTGTTGATGGTAGGCTTCACTTAGTTTTTGATATAGCTCCCACTGAAAGTTCTCAAAATTACACCCGTTCTTATTACATGAATGGGAGGGACTACATCATAAGTGGGAGTTGTGATGAACACGTCCGTATTTGCTGTGCTCAAACAGGGAGGCGCCTGAGAGATATATCCCTCGAGGGAAGAAACTTAGGAAGTTCCGTGTTTGTTCAATCTTTGAGGGGTGATCCTTTCCgaGATTTCAATATGAGCGTGTTAGCAGCTTACATGCGGCCAGGCATCAAGTCTAAAATTGTCAAGatCAACTTACTAGCATCTGGTGGCCATGCCAAGGATGATTCTGATGATCTGCGCCCTTGCCCGTTCCACAGTATGGGAGCTTGA 2418 0.3916 MGMAIDIQTLEDRYLDSCRRHGVLPNSSILSSLFKSEVKKSNHELCSLEILIDDLKDVDIAPLLDLCMNLDTSEIEVVDVRNESSCVLNGEYALSLMRAINQKLRVVHLQDLSFGKDFLRDISQRGLACQVLTLRCSRFRKLNLTGEFMHMHTLNLDFSSSLTCFQEGCFNCMPNLMRLSMCDTRITNLWTTVAALSKLPSLIELRFQYWQYCNDAGTSFISSSGKSDGTADFSLLDRVPFIGESYTDTTELTDPNFSAEDPLRNFYSFDEEVINHDVQSMVEDSSDDSEVDFTSRQHRYWLSDVFPGWNSEVPLQNENEDGEESLQGAFTERIADVSMKYMSRHASPICYEKHYREFMIASLPNLKNLDNMPIRKIDKERATGIFSQYFEYLPYKWKHKESVVSILQKREIKSGHHKVQSSKLRPSYPSGKSQYFYTRSLSAAKLGSSTWPFLHPLSLLGCELDKGFHPRQFEYHPSDSSLMVFGTLDGEVVVINHENEHIVSYIPSLGAMNSVLGLCWLKKYPSKLIAGSDNGSLKLYDIHQIPRKVTGIRGNCGCVTFDEFDQLTSVHVNSADELFLASGYSRNVALYDINSGKRLQVFTDMHRGHINVVKFANHSPSIFATSSFDHDVKMWDLRQKPIHPCFTVSSSRGNVMVCFSPDDQYILASAVDNEVRQFLAVDGRLHLVFDIAPTESSQNYTRSYYMNGRDYIISGSCDEHVRICCAQTGRRLRDISLEGRNLGSSVFVQSLRGDPFRDFNMSVLAAYMRPGIKSKIVKINLLASGGHAKDDSDDLRPCPFHSMGA 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0491 805 Gene3D Ribonuclease Inhibitor 96 385 IPR032675 -
Ssu7g0491 805 ProSiteProfiles Trp-Asp (WD) repeats profile. 603 638 IPR001680 GO:0005515
Ssu7g0491 805 Gene3D - 469 754 IPR015943 GO:0005515
Ssu7g0491 805 PANTHER BNAC09G30780D PROTEIN 1 791 IPR046377 GO:0071493|GO:0080008
Ssu7g0491 805 SMART LRRcap_2 352 370 IPR003603 -
Ssu7g0491 805 Pfam WD domain, G-beta repeat 607 636 IPR001680 GO:0005515
Ssu7g0491 805 SUPERFAMILY RNI-like 93 219 - -
Ssu7g0491 805 SUPERFAMILY WD40 repeat-like 469 735 IPR036322 GO:0005515
Ssu7g0491 805 SMART WD40_4 595 636 IPR001680 GO:0005515
Ssu7g0491 805 SMART WD40_4 641 679 IPR001680 GO:0005515
Ssu7g0491 805 SMART WD40_4 499 541 IPR001680 GO:0005515
Ssu7g0491 805 SMART WD40_4 553 592 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0491 522 722 Miscellaneous Gene Families AT5G08390 23.267 6.66e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0491 - - gmx:100806443 1506.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0491 7 9144454 9152006 Ssu7g0491 7 9144454 9152006 ECH