Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0470 ATGGCTTTCTCGGAGTTCCGACAGCTCGACGAGAAGACCCTCATCGAATACATAAAGTCCGTCCCCTCCCTCTCCTCCAAACTCGCCAACAACTTGGACGACTTATCGGTCAAAGAAGTCGGCGACGGCAACCTTAACTTCGTCTACATTGTTTCCAACCCCGCAGGTTCTCTTGTCATCAAACAGGCTCTGCCGTACGTTCGTTGCATAGGGGAATCGTGGCCTATGACGAAGGAGAGAGCGTATTTTGAGTCACTGGCACTGAAAGAAGAGTTTCGTTTGAGCCCTGAGCATGTCCCTGAAGTGTATCACTTTGACCGTACCATGTCTTTGATCGGTATGCGTTACTTGGAGCCCCCACATATAATCCTCAGAAAAGGGTTGATCGCTGGGATTGAGTACCCTCTTTTGGCTGAACACATGGCTGATTTCATGGCAAAGACACTCTTCTTCACGTCTCTGCTTTTCCGTTCCACTGCTGAGCACAAACGGGATGTTGCCGAATTTTGTGGGAATGTGGAGTTATGCAGGCTCACTGAGCAGGTCGTTTTCTCTGACCCTTATAAAGTTTCTCAATATAATCGTTGGACTTCCCCCTATCTTGATCATGATGCTGAGGCTGTTCGGGAAGACAATCTGCTGAAGCTTGAAGTTGCTGAGCTGAAATCTAAGTTCTGTGAGAGGGCCCAGGCACTAATACATGGAGATCTACACACCGGTTCTGTGATGGTTACTCGTGAATCAACTCAAGTTATTGATCCAGAATTTGCATTCTATGGACCAATGGGTTTTGATATTGGAGCATTCTTGGGAAACTTGATTTTGGCTTTCTTTGCTCAAGATGGACATGCTGATCAAGCAAATGATCGAAAAGCCTATAAGGAGTGGATTCTTAAGACGATTGAAGACAGTTGGAATCTTTTTCACCACAAATTCACTTCACTTTGGGATGAGCACAGAAATGGTGCTGGTGAAGCATATCTTCCAGCTATCTATAACAATCCTGAGGTTCAACTGCTTGTACAGAAGAAATACATGACAGATTTGTTTCATGATAGTCTTGGATTTGGTGCAGCTAAAATGATAAGGAGAATTGTTGGTGTGGCACATGTTGAGGATTTCGAATCCATTGCTGATGCTGGTAAGCGGGCAACATGTGAACGGCGGGCACTTGATTTAGCTAAGATGCTtctcaaagaaagaagaaaatttgaaGGCATTGCTGAAATTATTTCAGCAATTCGGCAATTCTAG 1254 0.4426 MAFSEFRQLDEKTLIEYIKSVPSLSSKLANNLDDLSVKEVGDGNLNFVYIVSNPAGSLVIKQALPYVRCIGESWPMTKERAYFESLALKEEFRLSPEHVPEVYHFDRTMSLIGMRYLEPPHIILRKGLIAGIEYPLLAEHMADFMAKTLFFTSLLFRSTAEHKRDVAEFCGNVELCRLTEQVVFSDPYKVSQYNRWTSPYLDHDAEAVREDNLLKLEVAELKSKFCERAQALIHGDLHTGSVMVTRESTQVIDPEFAFYGPMGFDIGAFLGNLILAFFAQDGHADQANDRKAYKEWILKTIEDSWNLFHHKFTSLWDEHRNGAGEAYLPAIYNNPEVQLLVQKKYMTDLFHDSLGFGAAKMIRRIVGVAHVEDFESIADAGKRATCERRALDLAKMLLKERRKFEGIAEIISAIRQF 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0470 417 SUPERFAMILY Protein kinase-like (PK-like) 5 416 IPR011009 -
Ssu7g0470 417 PIRSF MTRK 1 417 IPR009212 GO:0009086|GO:0046522
Ssu7g0470 417 Gene3D - 121 417 - -
Ssu7g0470 417 Gene3D Phosphorylase Kinase; domain 1 1 120 - -
Ssu7g0470 417 PANTHER METHYLTHIORIBOSE KINASE 2 416 - -
Ssu7g0470 417 Pfam Phosphotransferase enzyme family 37 276 IPR002575 -
Ssu7g0470 417 PANTHER METHYLTHIORIBOSE KINASE 2 416 - -
Ssu7g0470 417 TIGRFAM MTRK: S-methyl-5-thioribose kinase 38 413 IPR009212 GO:0009086|GO:0046522
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0470 Ssu-Chr7 8870448 8878474 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0470 K00899 - gmx:100818359 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0470 7 8870448 8878474 Ssu7g0470 7 8870448 8878474 ECH