Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0451 ATGGCTtcaaaggacaaaaatgaaGAGCTTCATGTTCTATTGGTGGCATTTTCAGCACAGGGTCACATCAACCCTTTGCTTAGGCTAGGCAAAAGCCTACTAGCCAGAGGCCTCCACGTCACCCTTGCCACCACCGAATTAGTTTACCACCGCGTATTCAAATCCTCCACCACCATCGGCGACAACGCCACCGTCCCCACTTCCATCACCACCAACGGAATCCAAGTGCTTTTCTTCGCTGACGGCTTCGGAACCAGCCAAGACCCCAACACCAGCACCGCCGACCAATACATGGACCTCATAGGAAAATTCGGACCCATTAACCTCTCCAACATCATCAAAGACCACTTCCTCAACAGTTCCAAAAAACTCGCTTGCATTATCAACAACCCCTTTGTCCCGTGGGTAGCTGACCTAGCTGCCAATTACAAAATCCCATGTGCATGTCTCTGGATCCAACCCTGTGCTCTCTACGCCATATACTACCGTTTCTTCAACAAGCTCAACCAGTTCCCAACTCTCGAGGACCCTGAAATAAGTGTAAAGTTACCGGGTCTTCCCTTATTACAACCCCAAGACCTTCCATCTTTTGTTCTCCCATCAAAATCCTTTGGAAACTTGCCAAAGGTGTTGTCGGAGATGCTCCAACACATGAAGAAGCTGAAGTGGGTACTCGCTAACTCATTCTACGAGTTGGAGAAAGAGGCCATAGATTCCATGGCTGAGATATGCCCCATAACAACTGTGGGTCCACTAGTCCCTCCGTCGTTACTCGGCCAAGACCAAAACGAAGACGTGGGAATCGAAATGTGGAAGCCACAGGACTCGTGCATGGAGTGGCTCAACCACCAACCGAACTCTTCGGTTATATACGTCTCGTTTGGGAGCCTCGTTGTGTTATCCGCTAAGCAGTTAGAGAGCATAGCAAAGGCTCTTAAAAACAGTAACCGACCTTTTCTTTGGGTGATTAAGCCTCGAGAGGGAGAAGAAACTCTTCCACTTCCACATGGGTTTGTGGAAGAGACCAAAGAGAAAGGCATGGTTGTGCCGTGGTGCCCGCAAACGAAAGTGCTGAGTCACCCTGCGATAGCGTGTTTCTTAACGCATTGTGGGTGGAATTCAATGTTGGAAGCCATCACTACAGGCACGCCCATGATTGCTTGGCCTCAGTGGAGTGACCAACCCACCAACGCGAAACTGATTTCCGATGTGTTCCGTTTGGGGGTTCAGCTCTCACAGGAGAGTAGTGATGGCTTTGTTGCGGTGGAGCAAGTGGAAAGGGCTTTTGAACGGATTTTTGCGACAGAGGAGTTTAAGAGAAACGCGTCGGAGCTGAAACGCGCTGCAAGAGAGGCGGTGGCTCATGGTGGCTCTTCGGACCGGAATATCCAATCCTTTGTGGATGAAATTCTTGGTATCAACGTTGGAGGATAG 1434 0.493 MASKDKNEELHVLLVAFSAQGHINPLLRLGKSLLARGLHVTLATTELVYHRVFKSSTTIGDNATVPTSITTNGIQVLFFADGFGTSQDPNTSTADQYMDLIGKFGPINLSNIIKDHFLNSSKKLACIINNPFVPWVADLAANYKIPCACLWIQPCALYAIYYRFFNKLNQFPTLEDPEISVKLPGLPLLQPQDLPSFVLPSKSFGNLPKVLSEMLQHMKKLKWVLANSFYELEKEAIDSMAEICPITTVGPLVPPSLLGQDQNEDVGIEMWKPQDSCMEWLNHQPNSSVIYVSFGSLVVLSAKQLESIAKALKNSNRPFLWVIKPREGEETLPLPHGFVEETKEKGMVVPWCPQTKVLSHPAIACFLTHCGWNSMLEAITTGTPMIAWPQWSDQPTNAKLISDVFRLGVQLSQESSDGFVAVEQVERAFERIFATEEFKRNASELKRAAREAVAHGGSSDRNIQSFVDEILGINVGG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0451 477 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 272 447 IPR002213 GO:0008194
Ssu7g0451 477 PANTHER GLYCOSYLTRANSFERASE-RELATED 9 472 - -
Ssu7g0451 477 Gene3D Glycogen Phosphorylase B; 15 463 - -
Ssu7g0451 477 CDD GT1_Gtf-like 10 452 IPR002213 GO:0008194
Ssu7g0451 477 ProSitePatterns UDP-glycosyltransferases signature. 351 394 IPR035595 -
Ssu7g0451 477 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 470 - -
Ssu7g0451 477 Gene3D Glycogen Phosphorylase B; 265 451 - -
Ssu7g0451 477 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 9 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0451 Ssu-Chr7 8562248 8563681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0451 6 470 Glycosyltransferase AT2G23260 43.975 6.80e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0451 K13692 - gmx:100778995 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0451 7 8562248 8563681 Ssu7g0451 7 8562248 8563681 ECH