Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0447 ATGCAAAACCTCAATTTCCTTTCCCTAACCATCATTTCCCTCTCTCTCATCTACTCCCACACAAACACCATCCTAGTACAAGCCCTCACCTCAGCGTCAGACACTGCGGCCCTCAAAGCCTTCAAGGCCTCGATCAAACCCTCCTCCATCACGCCCTGGTCATGCCTCGCCTCATGGAACTTCACAACCGACCCATGCTCACTCCCTCGCCGCACCCACTTCCTCTGCGGCCTCACCTGCAACCCAGACTCCACAAGAATCAACCAAATCACCCTTGACCCAGCAAGCTACTCAGGCACACTCACCCCATTAATCTCTCAACTCACACAACTCACCACACTAGACCTCTCCGAAAACAACTTCTTCGGCCCAATCCCCTCTTCAATTTCCTCCCTCTCCAACCTCCAGACCTTAACCCTCCGATCCAATTCCTTCTCAGGCCCAATCCCTCCCTCCATAACCACCCTCAAATCACTCCAGTCCCTCGACCTCTCACACAATTATCTCTCCGGGTACCTCCCAAACTCCGTGAGCTCCCTCACCACCCTCCGCAGACTCGATCTCAGCTTCAACAAACTAACCGGCCCAATCCCGAAACTCCCACCCAACTTGCTGGAACTCGCGATCAAGGCCAATTCTCTATCTGGGCCTCTCCAAAAACAAAACTTCGAGGGGATGAACAATTTAGAAGTGGTGGAGCTCAGCGAGAACGCGCTCTCCGGAACGGTGGAGTCGTGGTTCTTCCTTTTGCCGTCGCTGCAGCAAGTGGACCTGGCCAACAACACCTTCACGGGGGTGCAGATCTCGAGACCAGCCGCGGCGCGTGGGGgtagcagcagcagcagcagcaaccTCGTCGCGCTCAACCTCGGGTTTAACAGAATCCGAGGCTACGCGCCCGCGAATCTCGCCGCGTATCCCGCGCTGTCGTTCCTGTCGATTCGCTACAACGCGCTGCGTGGCGCGATCCCGCTGGAGTACGGGGAGATCAAGTCCATGAAGAGGTTGTTCCTCGACGGGAACTTCCTCGTCTGGAAGCCGCCGGCGAGGTTGGTCGGCGCCGGCACGGCGGTTTCCGGCAGCCTGGGGGATAATTGTCTGCAGGGGTGTCCAGGGTCGTCGCAGCTGTGCTCGCCCGCACAGAAACCTAGCTCTGTTTGCAAGCAAGCCTACCGTGGTAGACCAACAACGTAG 1194 0.5595 MQNLNFLSLTIISLSLIYSHTNTILVQALTSASDTAALKAFKASIKPSSITPWSCLASWNFTTDPCSLPRRTHFLCGLTCNPDSTRINQITLDPASYSGTLTPLISQLTQLTTLDLSENNFFGPIPSSISSLSNLQTLTLRSNSFSGPIPPSITTLKSLQSLDLSHNYLSGYLPNSVSSLTTLRRLDLSFNKLTGPIPKLPPNLLELAIKANSLSGPLQKQNFEGMNNLEVVELSENALSGTVESWFFLLPSLQQVDLANNTFTGVQISRPAAARGGSSSSSSNLVALNLGFNRIRGYAPANLAAYPALSFLSIRYNALRGAIPLEYGEIKSMKRLFLDGNFLVWKPPARLVGAGTAVSGSLGDNCLQGCPGSSQLCSPAQKPSSVCKQAYRGRPTT 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0447 397 SUPERFAMILY L domain-like 58 348 - -
Ssu7g0447 397 Gene3D Ribonuclease Inhibitor 201 372 IPR032675 -
Ssu7g0447 397 Pfam Leucine Rich Repeat 110 132 IPR001611 GO:0005515
Ssu7g0447 397 Gene3D Ribonuclease Inhibitor 31 200 IPR032675 -
Ssu7g0447 397 Pfam Leucine rich repeat 133 193 IPR001611 GO:0005515
Ssu7g0447 397 Pfam Leucine rich repeat 202 261 IPR001611 GO:0005515
Ssu7g0447 397 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 9 396 - -
Ssu7g0447 397 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 396 - -
Ssu7g0447 397 SMART LRR_typ_2 180 207 IPR003591 -
Ssu7g0447 397 SMART LRR_typ_2 108 132 IPR003591 -
Ssu7g0447 397 SMART LRR_typ_2 156 179 IPR003591 -
Ssu7g0447 397 SMART LRR_typ_2 250 276 IPR003591 -
Ssu7g0447 397 PRINTS Leucine-rich repeat signature 180 193 - -
Ssu7g0447 397 PRINTS Leucine-rich repeat signature 159 172 - -
Ssu7g0447 397 Pfam Leucine rich repeat N-terminal domain 32 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0447 Ssu-Chr7 8465498 8466691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0447 37 391 Receptor kinase-like Gene Family AT3G05360 29.750 3.32e-31 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0447 - - gmx:100801713 609.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0447 7 8465498 8466691 Ssu7g0447 7 8465498 8466691 ECH