Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0305 ATGCCGGAGATGGATGAGCGCGTGGTTATACAGCAACCTCTCTCGGCCATAGCGGAGGCGTTTGAGGGACTGTCGAAGAGGCTGAAGGAGAGGAACAACGCCCAGGGGATTCGCTTGGACACCTTCTGCGAGGCCGCATCTCTCGTCTCCGTTCTCTTCCGTTGTCTCGGCCTCGCTTTCAAATTCGCTGAATTGGAATACGTCGCCAAGCTACATGGACTATTGGAAGCATCAAAGACGTGTCCCACTCTACAGGATGTTCTTAACCTTGATGTCGCCAGTGACACAGTGAAAACATCAGGAAGCTTTTCACGTAATCTGCGTAGAGTTCGGCAGGGTCTTGATCTTGTCAGAGCTATATTCGAACAACTTTTGTCAACTGACGATAATTCTCTGAAAGAAGTGGCTACAACAGCTTATGGACAGGTTTGTGCACCATATCACACATGGGCAGTAAGAACGGCTGTGTATGCTGGGATGTATACACTTCCAACCAGAGACCAACTGTTGCTGAAGCTCAATGAAACAGAGCAATCAGCCGAGAAGAAGATGAGAAGGTACATCACTGCCTCACTTCCAATTATAGAATACATTGATAAACTGTACCTTTCTCGAAATATTACGTTGGACTGGTGa 636 0.4764 MPEMDERVVIQQPLSAIAEAFEGLSKRLKERNNAQGIRLDTFCEAASLVSVLFRCLGLAFKFAELEYVAKLHGLLEASKTCPTLQDVLNLDVASDTVKTSGSFSRNLRRVRQGLDLVRAIFEQLLSTDDNSLKEVATTAYGQVCAPYHTWAVRTAVYAGMYTLPTRDQLLLKLNETEQSAEKKMRRYITASLPIIEYIDKLYLSRNITLDW 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0305 211 SUPERFAMILY Glycolipid transfer protein, GLTP 31 210 IPR036497 -
Ssu7g0305 211 PANTHER ACD11 HOMOLOG PROTEIN 8 211 - -
Ssu7g0305 211 Gene3D Glycolipid transfer protein 7 211 IPR036497 -
Ssu7g0305 211 PANTHER GLYCOLIPID TRANSFER PROTEIN-RELATED 8 211 - -
Ssu7g0305 211 Coils Coil 166 186 - -
Ssu7g0305 211 Pfam Glycolipid transfer protein (GLTP) 37 175 IPR014830 GO:0005737|GO:0120009|GO:0120013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0305 Ssu-Chr7 4993357 4995544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0305 10 211 Acyl Lipid Metabolism Gene Families AT4G39670 67.961 6.88e-101 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0305 - - gmx:100818548 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0305 7 4993357 4995544 Ssu7g0305 7 4993357 4995544 ECH