Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0237 ATGGTCAATGATGGCTTCATCCTCGTCGAAGAAGATCAGTGTGAAGTCTCTGAAGGCAAGGTGTTGGAGGTGGAGGAGGCTTTGGTGAATGCATCTCCAACTATGAAGCGCTTGATAGAAGAAAAGTGTAATGAGAGTGAGAATGTCATCACCTTGCCAGATATCTCCAGCAAAATCCTATCTAAGATCACTGAGTTCATCAAGCTTGACTTAGACATTGATGTGGCTCCCATTGATGCTGGTGTTGATGTTGATTGTAAGGCCTCTAAGAGTCCTACAAGTTTTAATAACTTGAATTCAGAGTTCATCGAGGTTGACCAAGACACACTGGTCAACCTTATCATGGCAGCACACTacctcaaaattaaaaaacttgtcGATTTAGGATGCAATGAAATGGCAGAAAGAATCAATGGAAACACCCCGGAACAGCTACGCCAGATTTTCAACCTCAAGAATGATTTTACTCCTGAGGAAGAAGAGGAGCATCAAAGGTTGGTGGCCCCATTGCTTTCTAAGAAATAA 525 0.4114 MVNDGFILVEEDQCEVSEGKVLEVEEALVNASPTMKRLIEEKCNESENVITLPDISSKILSKITEFIKLDLDIDVAPIDAGVDVDCKASKSPTSFNNLNSEFIEVDQDTLVNLIMAAHYLKIKKLVDLGCNEMAERINGNTPEQLRQIFNLKNDFTPEEEEEHQRLVAPLLSKK 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0237 174 PANTHER PUTATIVE-RELATED 16 165 - -
Ssu7g0237 174 Gene3D Potassium Channel Kv1.1; Chain A 13 168 IPR011333 -
Ssu7g0237 174 SUPERFAMILY Skp1 dimerisation domain-like 98 164 IPR036296 GO:0006511
Ssu7g0237 174 PIRSF SCF_Skp 10 167 IPR016897 GO:0006511
Ssu7g0237 174 Pfam Skp1 family, dimerisation domain 123 163 IPR016072 GO:0006511
Ssu7g0237 174 SUPERFAMILY POZ domain 17 69 IPR011333 -
Ssu7g0237 174 SMART skp1_3 17 122 IPR001232 GO:0006511
Ssu7g0237 174 PANTHER SKP1 16 165 IPR016897 GO:0006511
Ssu7g0237 174 Pfam Skp1 family, tetramerisation domain 17 68 IPR016073 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0237 Ssu-Chr7 3850877 3852379 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0237 K03094 - egt:105950727 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0237 7 3850877 3852379 Ssu7g0237 7 3850877 3852379 ECH