Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0232 ATGGCTAGTGTTTACACTGTTGGTGACCAAGAAGAATGGAGTAGCCAAACAAATTATGCTTCATGGGCAGAAAGATACAATTTTAGCCTCGGCGATGTTCTTGttttcaagtACGTGAAAGGGCAACACAATGTGTATGAAGTGACAGAGGACACTTTCCGATCGTGTGATGCAAGTAGTGGAGTGGTGGCTAAGTACGAGAGCGGAGAAGATCAAGTGGCACTCAATGAAGTGAAGAGATATTGGTTCATTTGCAACATAGCAGGGCACTGCCTTGGGGGCATGAGGTTTGGAATTCAAGTAAAAGATGGCAACAATTTTACTAATTCCACGGATGGTGCACCTCACCCACCAATTGAACAAACTCCCTCGGTTAATTCTTGCACCAGTGAAAGATGGAAAgcgattgaaaattttattcctTTCGGATTATTGTTgttcaactattatttttga 456 0.3925 MASVYTVGDQEEWSSQTNYASWAERYNFSLGDVLVFKYVKGQHNVYEVTEDTFRSCDASSGVVAKYESGEDQVALNEVKRYWFICNIAGHCLGGMRFGIQVKDGNNFTNSTDGAPHPPIEQTPSVNSCTSERWKAIENFIPFGLLLFNYYF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0232 151 Coils Coil 151 151 - -
Ssu7g0232 151 PANTHER BLUE COPPER PROTEIN 2 117 IPR039391 GO:0009055
Ssu7g0232 151 SUPERFAMILY Cupredoxins 2 101 IPR008972 -
Ssu7g0232 151 Pfam Plastocyanin-like domain 13 95 IPR003245 GO:0009055
Ssu7g0232 151 PANTHER BLUE COPPER BINDING PROTEIN-LIKE 2 117 - -
Ssu7g0232 151 CDD Phytocyanin 4 101 - -
Ssu7g0232 151 Gene3D - 1 107 IPR008972 -
Ssu7g0232 151 ProSiteProfiles Phytocyanin domain profile. 3 103 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0232 Ssu-Chr7 3797963 3798544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0232 3 101 Miscellaneous Gene Families AT2G31050 41.000 6.51e-20 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0232 - - gmx:100788784 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0232 7 3797963 3798544 Ssu7g0232 7 3797963 3798544 ECH