Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0230 ATGGAATCATTAGTTGAAGATATTGTGATTGTGGGAGCTGGGATTGCTGGGCTTACAACATCCTTGGCACTTCACAGGTTGGGTGTCCGAAGTTTGGTATTAGAACTTTCAGATACTTTAAGGGTCACTGGGTTTGCTCTAACAACATGGACAAACGCTTGGAAAGCCTTGGATGCTATTGGCGTCGGAGGCATTCTTCGTCAGCAACATGTGCAGCTAAAAGAGAATGTGACTACATCTTTGATTACGGGGCAACAAACATCAAGCTTGTCTTTAAAAGGCACAGGAAAACATGGAGACTGTGAAGTTCGCTGTGTTAGAAGGCAGTTAATGTTGGAAGCACTTGCTAACGAGCTTCCAAGTGGCACCATTAGGTACTTGTCAAAGGTTGTTGCTATTGAGGAATCTGGCTTCTCTAAGATAGTCCATCTTGCCGATGGAACAACCATCAAAACCaagGTATTAATCGGGTGTGATGGAATAAACTCAGTGGTGGCAAAGGGGCTGGGCTTCAAGGAGGCCTCATTTACTGGGAGATATGTAATCAGGGGTTATACCAAGTTGACGAGCAATCATGGGCTTACGCCCAAATTCATGCACTACTTTGGGAAAGGTTTTCGATCTGGTGTAATTCCTTGTGATGACAAGACTGTTTACTGGTTTTTAACTTGGACTCCCACCAGTCAAGACAAGGAGCTAGCAAAGAACCCAGCCAAAATGAAGCAATTAGTGTTGAGCAAGCTTGAGAAGATGCCAAGTGATATCAAATCCCTTATAGAGAAAACAGAACCAAAAGATATTTTAACATCTCCATTGAGATATAGACGTCAGTGGGAGCTCATGTTGGGGAATATTAGTAAAGGAAACGTTTGTGTTGTTGGAGATGCGTTTCACCCCATGGCCCCTGACCTTGGCCAAGGTGGGTGTTGTGCCTTGGAGGATGGGATTGTTTTAGCCAGGTGTCTTGCTGGTGCCTTCTCCCAAACACCAGCTAGGCACATTAAAGAGATGGATGAAGAGGGTAAGGTTAAGGAGCAATACAAAAAGATTGAGGCTGGCTTGAGGAAATATGCAAAAGAGAGAAGATGGAGAAACATTGATATCAGTGTTACGTCATATGTCCTGGGGTCTGTTCTGCAGGGTGATTTGGAATTGGTTGCACATTTTAGGGACAATGTTTTGGCTGACTTCCTAGCCGAGCTGCTGTTGAAGAAGTCAGATTTTGATTGTGGAAAACTTAACACCTCTAGTTAA 1254 0.4378 MESLVEDIVIVGAGIAGLTTSLALHRLGVRSLVLELSDTLRVTGFALTTWTNAWKALDAIGVGGILRQQHVQLKENVTTSLITGQQTSSLSLKGTGKHGDCEVRCVRRQLMLEALANELPSGTIRYLSKVVAIEESGFSKIVHLADGTTIKTKVLIGCDGINSVVAKGLGFKEASFTGRYVIRGYTKLTSNHGLTPKFMHYFGKGFRSGVIPCDDKTVYWFLTWTPTSQDKELAKNPAKMKQLVLSKLEKMPSDIKSLIEKTEPKDILTSPLRYRRQWELMLGNISKGNVCVVGDAFHPMAPDLGQGGCCALEDGIVLARCLAGAFSQTPARHIKEMDEEGKVKEQYKKIEAGLRKYAKERRWRNIDISVTSYVLGSVLQGDLELVAHFRDNVLADFLAELLLKKSDFDCGKLNTSS 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0230 417 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 - -
Ssu7g0230 417 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 - -
Ssu7g0230 417 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 - -
Ssu7g0230 417 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 318 - -
Ssu7g0230 417 Pfam FAD binding domain 7 327 IPR002938 GO:0071949
Ssu7g0230 417 PANTHER MONOOXYGENASE 2-RELATED 4 415 - -
Ssu7g0230 417 Gene3D - 7 384 IPR036188 -
Ssu7g0230 417 SUPERFAMILY FAD/NAD(P)-binding domain 7 397 IPR036188 -
Ssu7g0230 417 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 4 415 IPR044560 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0230 Ssu-Chr7 3767008 3775326 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0230 6 414 Miscellaneous Gene Families AT5G05320 49.512 7.77e-140 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0230 - - gmx:100808968 723.391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0230 7 3767008 3775326 Ssu7g0230 7 3767008 3775326 ECH