Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0221 ATGAGTGGCTACCACAGGAACTCAGATGATGATTTGAGGGCAGTGAGGGAGGAGGAGGGGATTCCTGAGTTAGAGGAAGAAGTAGAGAGAGAAGAGGTTGAGCACAAAGTGGTGAGTGTTgaagagaataataataataatgataatgaaggTGTTGAGCAAGTGGTGAGTGGTGTTGAAACAGTGAAGGTGGTGGATGTAGCCACTGAAAACCAAGGGGAGCAAAGGGGGCTTGCAGTTCTTGATACACCAGCAGAGGGGAGAGAGTTGCTTGAAGCTTTAAAAGATATTGAGGACCATTTTCTCAGGGCTTATGATTCTGGCAAGGATGTAACCAGGATGCTGGAGGCTAATAGGATTCCCCTTCATTCTAGTTTGGATGAAATAAAAGAAAGTTCGACTAAACTCATTCAGGCAATAACATGGAAGTCCATTTCATCTAGGCAATCATCATGCAAGAGTCTCATGGTTCCAAATGTGAAAAATTCTTCAACTTGGGTGGAATATAAGAATGATCTGTTTGATGATTATGGAGGAATGGATTCAGGAAGTCATTTATTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAACTGTTTGAGGAGGTTAAGGCTGGAGATAGCACACGGaagaattatgaaaaaaaatgcgCACAGTTGAGAAATAAGAATGTTAGAGGAGATGATGTACTAAGCACAGACAAAACTAGAGCTGAAGTGAAAGATCTATATGCTGGGATCTTGGTTGCCATTCGACGTGCAGAGTCAATCTCAAAGAGAATTGAGAAAATGAGAGATGAAGAATTACAACCTCAAATTGTTGAACTATTAAAAGGCCTTACTCAGTCATGGACAATCATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTATCTGAAGTCAAATACTTCACATGTGCCACGTATGGGAAATTCAGCAATCAATCTCATGGATTTGCGACTCTTCAGCTTGAAGCTCAGCTTCAAAATTGGTGCGACTGCTTCAAAGAGTACACTGCAGCGCAAAAAGCATATGTTGAAGCTCTCCATGGATGGCTGAGTAAGTTCATAGTCCCTGAAGTTGAATTTTACTCGAGAAGCAAAAATGTTGCCATGCCATACCAAGTCAACGGGCCACCTGCTACTTGTGATATGCAACGATTGGTTAGCTTCACTGCAAAAGTTACCCAATAA 1194 0.4028 MSGYHRNSDDDLRAVREEEGIPELEEEVEREEVEHKVVSVEENNNNNDNEGVEQVVSGVETVKVVDVATENQGEQRGLAVLDTPAEGRELLEALKDIEDHFLRAYDSGKDVTRMLEANRIPLHSSLDEIKESSTKLIQAITWKSISSRQSSCKSLMVPNVKNSSTWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCAQLRNKNVRGDDVLSTDKTRAEVKDLYAGILVAIRRAESISKRIEKMRDEELQPQIVELLKGLTQSWTIMLESHETQKKILSEVKYFTCATYGKFSNQSHGFATLQLEAQLQNWCDCFKEYTAAQKAYVEALHGWLSKFIVPEVEFYSRSKNVAMPYQVNGPPATCDMQRLVSFTAKVTQ 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0221 397 PANTHER OS09G0542500 PROTEIN 1 380 - -
Ssu7g0221 397 Coils Coil 14 50 - -
Ssu7g0221 397 Pfam Protein of unknown function (DUF632) 90 377 IPR006867 -
Ssu7g0221 397 PANTHER UNCHARACTERIZED 1 380 - -
Ssu7g0221 397 MobiDBLite consensus disorder prediction 1 33 - -
Ssu7g0221 397 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0221 Ssu-Chr7 3592773 3595998 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g0221 13 385 Acyl Lipid Metabolism Gene Families AT2G27090 33.409 3.42e-48 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0221 - - gmx:100807897 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0221 7 3592773 3595998 Ssu7g0221 7 3592773 3595998 ECH