Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0204 ATGTGCCACCTTCAGGCCATGGTCACTCATGTTGATGGTTTAATTTCTAGGATTCCTCAGTACAAGAAAGCATGGTGCATGCAAGGTGTGCAGGCAGCCTGGAGGCTTGGTAGGTGGGATTTGATGGATGAGTACCTCAGTGGAGCTGAAGAAGACGGTTTAGTTTGTAGTAGCTCTGAAAGTAATGCTTCATTTGACTTGAATGTTGCAAAGATTCTCCAGGCCATGATGAAGAGGGACCACTTCTCAGTAGCAGAGAAAATTGCTTTATCCAAGCAGTCACTAATTGCTCCCCTAGCTGCTGCAGGAATGGATTCTTACATGCGAGCCTACCCATTTGTTGTAAAACTTCACTTTCTACGGGAATTGGAGGACTTCCATTCTCTTCTGGGTGATGACTCTTTCTTAGAGAAATCATTTCACTTAGATGATCAAGCTTTCTCTAAATTAGTGGACAACTGGGACAATCGACTAAGGTTTACGCAGTCGTCACTCTGGGCTAGGGAGCCTCTCTTGGCTTTCAGAAGACTGGTTTTTGGTGCAAGTAGTCTTGGTGCTCAAGTTGGCAATTGCTGGCTTCAATATTCAAAACTATGTCGCCTGGCTGGTCATTACGAAACGGCAAATAGAGCAATTTTAGAAGCTCAGGCCTCTGGTGCACCTAATGTCCACATGGAAAAGGCAAAACTTCTCTGGAGCACTAGGCGGTCTGATGGTGCCATTGCAGTGTTGCAACAATCTCTCTTGAACATGCCTGTTGAGGTTTTAGGCTCTGCAACAATGTCATCTATTACTAGCCTTTCCCTTGTACCGCTTAACCCACAGCCTATTGTTTGTGAAAGTCAGGCCCTAAATGAGAATAGAGATATTGCAAAGACCCTTCTTCTATACTCCAGGTGGACTCATTACACTGGGCAGAAACAGAAGGAAGATGTAATAAGTCTTTATACCAGGGTGAGGGAACTGCAACCCAAATGGGAGAAAGGGTACTTTTATATTGCTAAGTATTGTGATGAAGTGCTTGGTGATGCCAGGAAACGCCAGGAGGAGAATTTTGAACATGGTCCTAGACTGGTTCCTTCAGCAACTGTTGCTGTTGGCTCATCAAATTCTAATGGTGAGAGGCGTTGGTGGTCCTATGTTCCTGATGTACTGTTATTCTATGCAAAAGGACTTCACAGGGGACACAAGAATTTATTTCAGGCACTTCCAAGGTTATTAACCCTGTGGTTTGACTTTGGAAGCATGTATCAAAGAAGTGGTTCATCAAACAAGGATTTAAAGAATGTACATGGGAAGGTAATGAGTATTCTGAGAGGCTGTTTGAAGGATTTACCAACATACCATTGGTTGACAGTGCTACCTCAATTGGTTTCAAGAATTTGCCACCAGAATGAAGAAATTGTTCGACTGGTCAAACTTATCATTACCTCTGTTCTCTGTCAGTATCCACAACAGGGCCTATGGATTATGGCTGCAGTTTCAAAATCCACTGTTCCTTCAAGGCGGGAAGCAGCAGCTGAAATCATACAAGCTGCTCGTAAAGGTTTCAGCCCAGGAAGTAAGGAAAACAGTTTATTTGTTCAATTTGCTACCCTGATTGATCATCTGATCAAGTTATGCTTCCATGCTGGTCAGTCAAGAGCAAAGACAATTAATCTCTCAACTGAATTTAGTTCTCTGAAAAGGATGATGCCCCTGGGAATTATAATGCCAATTCAACAATCTCTAACTGTTAATCTTCCAACATATGATGGGAATCTGGGTGATTCACGTATGTCTAATATCTTTTCTACCACGGATCTTCCTACTATATCAGGCATTGCTGATGAGGCAGAAATTCTTTCGTCTCTTCAGCGGCCTAAGAAAATCATTCTATTAGGCAGTGATGGTCTTGAGCACCCATTTCTTTGCAAACCGAAGGATGACCTCCGCAAAGATGCTCGCATGATGGAGTTCACTGCAATGATCAACCGATTGCTATCCAAATATCCTGAGAGTCGTCGAAGGAAGCTCTATATTCGAACATTTGCTGTGATTCCTCTGACAGAGGACTGTGGCATGGTAGAGTGGGTGCCCCACACTCGTGGACTTCGACAAATTCTTCAAGACATATATATTACCTGTGGAAAATTTGATAGGCAGAAAACTAATCCtcatattaaacaaatttatgatCAATGCCAAGGTAAAATGCCAGAGGATGAGATGCTAAAGAACAAAATCCTTCCGATGTTTCCTCCTGTTTTCCACAAATGGTTCCTGACAACATTTTCAGAGCCTGCTGCATGGTTTAGGGCCCGTGTTGCTTATGCTCACACGACTGCAGTTTGGTCCATGGTTGGGCATATTGTGGGGCTGGGTGACCGGCATGGTGAAAACATTCTTTTTGATTCTACCAGTGGTGATTGTGTTCACGTTGATTTCAGTTGCTTATTTGACAAAGGCTTGCAGCTGGAGAAGCCCGAGCTTGTTCCTTTTAGGCTAACCCAGAATATGATTGATGGCTTAGGTATCACTGGATATGAGGGTATCTTCTTGAGGGTTTGTGAAATTACGCTTTCTGTTCTGAGGACGCACAGGGAGACTCTCATGAGCGTGCTTGAAACTTTCATCCACGATCCTCTCGTGGAGTGGACAAAATCTCACAAGTCCAGTGGTGTAGAAGTTCAGAATCCACATGCACAGAGAGCAATTAGTAATATTGAGGCAAGGTTAGAAGGAGTGGTTGTTGGTGTTGGAGCTGCGCCATCATTGCCTCTTGCTGTAGAAGGTCAAGCTCGTAGACTAATTGCAGAAGCAGTCTCTCACAAGAATCTTGGAAAGATGTACATATGGTGGATGCCTTGGTTTTGA 2856 0.4338 MCHLQAMVTHVDGLISRIPQYKKAWCMQGVQAAWRLGRWDLMDEYLSGAEEDGLVCSSSESNASFDLNVAKILQAMMKRDHFSVAEKIALSKQSLIAPLAAAGMDSYMRAYPFVVKLHFLRELEDFHSLLGDDSFLEKSFHLDDQAFSKLVDNWDNRLRFTQSSLWAREPLLAFRRLVFGASSLGAQVGNCWLQYSKLCRLAGHYETANRAILEAQASGAPNVHMEKAKLLWSTRRSDGAIAVLQQSLLNMPVEVLGSATMSSITSLSLVPLNPQPIVCESQALNENRDIAKTLLLYSRWTHYTGQKQKEDVISLYTRVRELQPKWEKGYFYIAKYCDEVLGDARKRQEENFEHGPRLVPSATVAVGSSNSNGERRWWSYVPDVLLFYAKGLHRGHKNLFQALPRLLTLWFDFGSMYQRSGSSNKDLKNVHGKVMSILRGCLKDLPTYHWLTVLPQLVSRICHQNEEIVRLVKLIITSVLCQYPQQGLWIMAAVSKSTVPSRREAAAEIIQAARKGFSPGSKENSLFVQFATLIDHLIKLCFHAGQSRAKTINLSTEFSSLKRMMPLGIIMPIQQSLTVNLPTYDGNLGDSRMSNIFSTTDLPTISGIADEAEILSSLQRPKKIILLGSDGLEHPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRQILQDIYITCGKFDRQKTNPHIKQIYDQCQGKMPEDEMLKNKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTSGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGIFLRVCEITLSVLRTHRETLMSVLETFIHDPLVEWTKSHKSSGVEVQNPHAQRAISNIEARLEGVVVGVGAAPSLPLAVEGQARRLIAEAVSHKNLGKMYIWWMPWF 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0204 951 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 774 794 IPR018936 GO:0016301
Ssu7g0204 951 ProSiteProfiles FATC domain profile. 919 951 IPR003152 GO:0005515
Ssu7g0204 951 PANTHER SERINE/THREONINE-PROTEIN KINASE ATR 1 947 - -
Ssu7g0204 951 SMART pi3k_hr1_6 635 940 IPR000403 -
Ssu7g0204 951 Gene3D - 747 908 IPR036940 GO:0016301
Ssu7g0204 951 SMART FATC_2 919 951 IPR003152 GO:0005515
Ssu7g0204 951 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 608 921 IPR000403 -
Ssu7g0204 951 SUPERFAMILY Protein kinase-like (PK-like) 598 883 IPR011009 -
Ssu7g0204 951 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 1 947 - -
Ssu7g0204 951 Pfam FATC domain 920 951 IPR003152 GO:0005515
Ssu7g0204 951 Pfam Phosphatidylinositol 3- and 4-kinase 635 880 IPR000403 -
Ssu7g0204 951 CDD PIKKc_ATR 605 881 - -
Ssu7g0204 951 Gene3D - 572 692 - -
Ssu7g0204 951 Pfam FAT domain 30 408 IPR003151 GO:0005515
Ssu7g0204 951 ProSiteProfiles FAT domain profile. 1 497 IPR014009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0204 Ssu-Chr7 3411280 3415617 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0204 K06640 - gmx:100804117 1842.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0204 7 3411280 3415617 Ssu7g0204 7 3411280 3415617 ECH