Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3691 ATGTCATCCAACGATCAAATGGAAGGTGAAGAAAGGACTGAATTGCTGAGTGCAGTTGAGGATCATCATGGAGGAGTCGTTGTAAACGTGGAGGATCAGGAGCCTCTGGATTCTATGCTCTTCTGTTCTATATTGGAAGCTTCAATGTGCAATTGGAGGCAACAGGGAAAGAAAGGGGTCTGGATCAAGTTGCCCATACAACATTCAAATCTTGTTGATTCAACAGTTAAGGTCGGATTTAGGTACCACCATGCTGAGCCGGATTACTTGATGCTTGTACGTTGGATTCCAGATACTCCTGCTACCATTCCAGCAAATGCTTCACATCGCGTGGGTGTTGGTGCTTTTGTCCTCAACAACAAGAACGAGGTGCTTGTGGTTCAGGAAACCAGTGGCAAATTCAGAGGCACAGGTGTATGGAAGATGCCTACAGGAGCTGTTAATGAAGGCGAGGACATTTGTGATGCTGTAATTAGAGAAGTCAAAGAAGAGACAGGGataGAGACAAAGTTTGTTGAAGTTTTAGCATTCAGGCAAAGCCATAAGTCGTTCTTCGAGAAATCAGATTTGTTCTTTGTTTGCATGTTGCAACCTCAATCGTTTGACATTCAGAGTCAGGTTTCAGAAATTGAGACAGCGAAGTGGATGCCTGTTGAAGATTATGCGGCCCAGCCTTTTGTGCAAGAAAATGAGCTCTTTGactttattacaaaaatatgccTTTCAAAGTTGGATGGCAACTACACTGGTTTTTCTAACGTACTTACTTGTACATCTTCTGGCAAGAAAACCTATCTGTACTTTAACAGCCGGGATGCCGGTCCTTTGTTAGCTTCCAAACCTGAGCAAGCTTGA 855 0.4281 MSSNDQMEGEERTELLSAVEDHHGGVVVNVEDQEPLDSMLFCSILEASMCNWRQQGKKGVWIKLPIQHSNLVDSTVKVGFRYHHAEPDYLMLVRWIPDTPATIPANASHRVGVGAFVLNNKNEVLVVQETSGKFRGTGVWKMPTGAVNEGEDICDAVIREVKEETGIETKFVEVLAFRQSHKSFFEKSDLFFVCMLQPQSFDIQSQVSEIETAKWMPVEDYAAQPFVQENELFDFITKICLSKLDGNYTGFSNVLTCTSSGKKTYLYFNSRDAGPLLASKPEQA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3691 284 CDD Nudix_Hydrolase_12 109 240 - -
Ssu6g3691 284 ProSitePatterns Nudix box signature. 145 166 IPR020084 GO:0016787
Ssu6g3691 284 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 68 86 IPR003293 -
Ssu6g3691 284 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 106 124 IPR003293 -
Ssu6g3691 284 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 194 218 IPR003293 -
Ssu6g3691 284 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 90 106 IPR003293 -
Ssu6g3691 284 Pfam NUDIX domain 109 229 IPR000086 -
Ssu6g3691 284 Pfam Nudix hydrolase domain 16 96 IPR040618 -
Ssu6g3691 284 PANTHER NUDIX FAMILY HYDROLASE 10 278 - -
Ssu6g3691 284 ProSiteProfiles Nudix hydrolase domain profile. 108 240 IPR000086 -
Ssu6g3691 284 SUPERFAMILY Nudix 75 231 IPR015797 -
Ssu6g3691 284 PANTHER NUDIX HYDROLASE RELATED 10 278 IPR003293 -
Ssu6g3691 284 Gene3D - 13 101 - -
Ssu6g3691 284 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 110 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3691 Ssu-Chr6 81002142 81006146 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3691 - - gmx:100818821 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3691 6 81002142 81006146 Ssu6g3691 6 81002142 81006146 ECH