Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3684 ATGAGATTAGCGGTGAGGCATGCTTTGGTGTTTGCGTTAATTGGGGCGTTGTGGAACTTGCAAAGGTCAGAGGGTATCAGATTTGTGATAGACAGAGACGAGTGTTTCTCCCATGATGTCAAGTACGAGGGTGACACTGTTCATGTCTCTTTCGTTGTTATTAAGGCTGATTCTCCCTGGCATTACGGCGACGAAGGTGTCGATCTCGTGGTAAAGGGACCTTCTGGTGAGCAAATTCAAGATTTTCGTGACAAGACCAGTGAGAAGTTTGACTTTGTGGCTCACAAATCAGGGGTCCATAAATTCTGCTTCACCAACAAGTCTCCGTATCATGAAACCGTTGATTTTGATGTACATGTTGGTCACTTCTCTTACTTTGAGCAACATGCAAAAGATGAGCATTTCACCCCTCTGCTGGAGCAGATAGGAAAGTTGGAGGAAGCTCTATACAACATTCAGTTTGAACAGCATTGGTTAGAGGCTCAGACTGACCGCCAAGCAATAgTGAACGATGCAATGAGCCGAAGAGCAGTACACAAGGCAATTTTTGAATCAGCAGCACTGATTGGGGCTAGTGCGCTTCAAATCTACCTTCTACAGCGATTGTTTGAACGAAAGTTGGGTACCTCAAGAGTTTAG 639 0.4491 MRLAVRHALVFALIGALWNLQRSEGIRFVIDRDECFSHDVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPSGEQIQDFRDKTSEKFDFVAHKSGVHKFCFTNKSPYHETVDFDVHVGHFSYFEQHAKDEHFTPLLEQIGKLEEALYNIQFEQHWLEAQTDRQAIVNDAMSRRAVHKAIFESAALIGASALQIYLLQRLFERKLGTSRV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3684 212 PANTHER TMP21-RELATED PROTEIN-RELATED 23 208 - -
Ssu6g3684 212 Pfam emp24/gp25L/p24 family/GOLD 33 204 IPR009038 -
Ssu6g3684 212 ProSiteProfiles GOLD domain profile. 33 120 IPR009038 -
Ssu6g3684 212 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 23 208 IPR015720 -
Ssu6g3684 212 SMART EMP24_GP25L_2 25 204 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3684 Ssu-Chr6 80943174 80945418 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3684 - - gmx:100775345 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3684 6 80943174 80945418 Ssu6g3684 6 80943174 80945418 ECH