Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3653 ATGCACAGGCTCTCTACTCGCTCTTCCTCCGTCTCTGCCTTGCTGCGCCATGGCGGCGCACTTCGCCGGGACGTCGTTGCTCCCATTTCCTCTTCTCACTTACCTACGCCGACGCTGGGTGAGAATGATGCCAAAGCTAGATGGTTTTCTATTCTGGGCTCAGAGACAGTTGAATCCACAACTCGTCATCCGAACTTGAAAAGGGATTTGTTCTTGGGCAAACGATATGAATCAACTGCTGCGGAATCTTCTGCATCCGCTTCCCCACCGCCCGAGAGATATGAGTACCAAGCTGAGGTTAGTCGCCTCATGGACCTCATTGTTAACAGTTTATACAGCAACAAGGAAGTATTTCTTAGGGAGCTTATCAGCAACGCAAGTGATGCTTTGGATAAGCTGCGGTTTCTGAGTGTAACAGAGCCTGAACTGTCGAAGGATGCAGTTGATTTTGATATCCGAATTCAAGCTGATAAGGATAATGGGATCATCACTATTACTGATACAGGCATTGGTATGACTAGGCAAGAACTAGTTGATTGTCTTGGAACTATCGCTCAAAGTGGAACTGCAAAGTTTTTGAAGGCTGTAAAGGATAGCAAGGATGCTGGTAGTGACAACAACTTAATTGGCCAATTTGGTGTGGGATTTTATTCTGCTTTTCTGGTTTCTGATCGGGTTGTTGTCTCAACAAAGAGTCCAAAATCCGATAAGCAATATGTTTGGGAAGGAGAGGCAAATGCTAGCTCATATACCATATCTGAGGAGACAGATCCTGATAAGCTGATTCCAAGAGGAACTCACCTTACACTGTATCTTAAGAGGGATGACAAAGGTTTTGCTCATCCAGAGCGGATTCAGAAGCTTGTGAAAAACTATTCACAATTTGTCTCATTCCCAATATACACTTGGCAGGAAAAAGGATACACCAAAGAAGTGGAAGTCGATGATGAGGATACAGCTGAAGCCAAAAAGGATGATCAAGATGAGAAGACTGAGaaaaagaagaaaactaaaaCTGTTGTTGAGCGGTACTGGGATTGGGAGCTGACAAATGAGACCCAACCAATCTGGCTTCGTAATCCTAAAGAAGTCACTAAGGAGGAGTACAACGAATTCTACAAGAAAACTTTTAATGAATACCTTGAGCCATTAGCATCGTCTCACTTTACCACAGAGGGTGAGGTGGAATTTAGATCTATACTTTTTGTTCCTGCCTTTGCTCCCTCAGGGAAGGATGACATAATCAATCCCAAGACCAAGAATATAAGACTTTATGTGAAGAGAGTGTTCATTTCAGATGACTTTGATGGAGAACTGTTCCCCCGATACTTAAGCTTTGTCAAAGGTGTTGTTGACTCAAATGACCTTCCACTCAATGTGTCACGTGAAATTCTTCAAGAGAGCCGCATAGTGCGGATTATGAGGAAACGTTTAGTTCGGAAAGCTTTTGACATGATTCTGGGAATATCCATGAGTGAGAACAGAGAGGACTATGAGAAGTTCTGGGAGAACTTTGGCAAACACTTGAAATTGGGTTGCATTGAAGACCGTGAGAATCACAAACGTATTGCTCCATTGCTTCGATTTTTCTCATCCCAAAGTGATGAAGAACTGATCAGCTTGGATGAATATGTTGAGACCATGAAACCTGATCAAAAGGATATTTATTACATTGCTGCTGACAGTGTGACTAGTGCAAAGAGCACACCTTTCTTGGAGAGACTTGTGGAGAAGGATCTTGAAGTGCTGTTTTTGGTGGATCCAATAGATGAGGTTGCTGTTCAAAACCTTAAATCATACAAGGAAAAGAATTTTGTTGACATTAGCAAGGAAGACTTGGATCTAGGTGATaagaatgaggaaaaagaaaaagaaatgaagcaGGAATTTGGCAAAACATGTGACTGGATCAAGAAACGATTGGGAGATAAAGTTGCAAGTGTGCAAATTTCAAACCGACTTAGCTCTTCACCTTGTGTTCTGGTGTCTGGAAAATTTGGTTGGTCTGCAAACATGGAAAGGCTGATGAAGGCACAAACTATGGGTGATGCATCCAGCTTGGAATTCATGAGGAGCAGAAGGGTGTTTGAGATCAACCCTGACCATTCTATTATCAGGAACTTGGATGCTGCATTCAAAACAAATCCCAACGATGAAGATGCCCTCAGAGCTATCGATCTTTTGTATGATGCTGCTTTGGTTTCCAGTGGTTTTACGCCTGATAATCCAGCACAACTTGGAGGGAAGATATACGAGATGATGGGTATGGCTCTCACTGGTAAATGGTCAACACCTGGTCAGTTCCAGTCCACTGTAACCCAGCCCCATACCCCTGAAACTGTAGAAGCTGAGGTGGTTGAACCTAGTGAGGCTGGCAGTCAGAAGTGA 2388 0.4263 MHRLSTRSSSVSALLRHGGALRRDVVAPISSSHLPTPTLGENDAKARWFSILGSETVESTTRHPNLKRDLFLGKRYESTAAESSASASPPPERYEYQAEVSRLMDLIVNSLYSNKEVFLRELISNASDALDKLRFLSVTEPELSKDAVDFDIRIQADKDNGIITITDTGIGMTRQELVDCLGTIAQSGTAKFLKAVKDSKDAGSDNNLIGQFGVGFYSAFLVSDRVVVSTKSPKSDKQYVWEGEANASSYTISEETDPDKLIPRGTHLTLYLKRDDKGFAHPERIQKLVKNYSQFVSFPIYTWQEKGYTKEVEVDDEDTAEAKKDDQDEKTEKKKKTKTVVERYWDWELTNETQPIWLRNPKEVTKEEYNEFYKKTFNEYLEPLASSHFTTEGEVEFRSILFVPAFAPSGKDDIINPKTKNIRLYVKRVFISDDFDGELFPRYLSFVKGVVDSNDLPLNVSREILQESRIVRIMRKRLVRKAFDMILGISMSENREDYEKFWENFGKHLKLGCIEDRENHKRIAPLLRFFSSQSDEELISLDEYVETMKPDQKDIYYIAADSVTSAKSTPFLERLVEKDLEVLFLVDPIDEVAVQNLKSYKEKNFVDISKEDLDLGDKNEEKEKEMKQEFGKTCDWIKKRLGDKVASVQISNRLSSSPCVLVSGKFGWSANMERLMKAQTMGDASSLEFMRSRRVFEINPDHSIIRNLDAAFKTNPNDEDALRAIDLLYDAALVSSGFTPDNPAQLGGKIYEMMGMALTGKWSTPGQFQSTVTQPHTPETVEAEVVEPSEAGSQK 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3653 795 Pfam Hsp90 protein 279 762 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu6g3653 795 Hamap Chaperone protein HtpG [htpG]. 79 755 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu6g3653 795 Gene3D - 611 758 IPR037196 -
Ssu6g3653 795 SUPERFAMILY Ribosomal protein S5 domain 2-like 353 611 IPR020568 -
Ssu6g3653 795 Gene3D - 351 523 - -
Ssu6g3653 795 PANTHER BNAA05G29880D PROTEIN 31 792 - -
Ssu6g3653 795 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 92 306 IPR036890 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 282 300 IPR020575 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 209 231 IPR020575 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 264 281 IPR020575 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 92 112 IPR020575 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 113 135 IPR020575 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 180 197 IPR020575 -
Ssu6g3653 795 PRINTS 90kDa heat shock protein signature 162 179 IPR020575 -
Ssu6g3653 795 Gene3D - 78 323 IPR036890 -
Ssu6g3653 795 PIRSF HSP90_HTPG 65 793 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu6g3653 795 CDD HATPase_Hsp90-like 101 296 - -
Ssu6g3653 795 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 114 274 IPR003594 -
Ssu6g3653 795 PANTHER HEAT SHOCK PROTEIN 90 FAMILY MEMBER 31 792 IPR001404 GO:0005524|GO:0006457|GO:0016887|GO:0051082|GO:0140662
Ssu6g3653 795 Gene3D - 524 610 - -
Ssu6g3653 795 MobiDBLite consensus disorder prediction 766 795 - -
Ssu6g3653 795 SUPERFAMILY HSP90 C-terminal domain 634 754 IPR037196 -
Ssu6g3653 795 ProSitePatterns Heat shock hsp90 proteins family signature. 112 121 IPR019805 GO:0005524|GO:0006457|GO:0051082
Ssu6g3653 795 MobiDBLite consensus disorder prediction 312 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3653 Ssu-Chr6 80379572 80385460 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3653 K09487 - gmx:100794913 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3653 6 80379572 80385460 Ssu6g3653 6 80379572 80385460 ECH