Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3615 ATGACTGTGGGGGCAGGGATATCTGTTGCAGATGGCAACTTGATGGTGTTGGGGAACAGAGTGCTGAGTCAGGTCCATGACAACATTGTTGTTACCCCTGCATGTGGGGGTGCTTTGCTCAATGGGGCATTCATTGGGGTCGCATCCCATCACAAGGGTAGCCGCACAGTCTTCCCAATTGGCAAGCTTCAgGGGTTGCGATTTATGTGTGTTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGCACTTGCGGACAAGAAGTCCCCATTGAGACGCAGTTCTTGCTTGTGGAAGCAGACGGTGGCTCTGATATTGACGGAGGAGAAGACCAAGCTGCTGCTACCTATGCAGTTTTCTTACCCCTCCTCGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGATCAAAACGAGATTGAGATCTGTGTGGAAAGCGGTTGTCCTGCTGTGGAGGAATTCGATGGGACTCATCTGGTTTTTATTGGGGCTGGATCCGACCCTTATGAAGTCATAACAAATGCTGTCAAGACTGTTGAGAAACACTTACAGACCTTTGCTCATCGCGAGCGAAAGAAGATGCCAGATATGTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACTAATGTCACTTCCGAGAATGTGAAGCAAGGATTGCAGAGccTCGAGAAAGGTGGAATTCCTGCtaagtttgttataattgatgATGGATGGCAATCTGTTGGGATGGATCCCAATGGTATTGAATGGAAGTCTGATAGTGCAGCCAACTTTGCAAATCGCTTAACGAACATCAAAGAGAATCACAAGTTCCAGAAAGATGGCAAGGAAGATCAGCGGGTAGAGGACCCAGCTCTGGGACTTAGTCATATTACCAATGAAATCAAAGTAGAGCATGATATAAAGTACGTATATGTGTGGCATGCAATAACAGGATATTGGGGTGGTGTTAAACCTGGGGTTACTGGCATGGAGCACTATGACTCAAAGATGACCTTCCCTGTCTCATCTCCCGGAGTTGAGTCAAATCAACCAGATGAAGCTTTTACAACCATTGCCATCAATGGACTTGGCCTTGTGAATCCTGAAAAAGTTTTTCACTTTTATGATGAACTCCACTCATATTTGGCATCTGCTGGTATTGATGGTGTCAAAGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGAAGGGTGAAACTTGCAAGGAAATACCACCAGGCATTAGAGGCATCAATCTCTAGGAACTTCCCTGATAACGGAATCATTTGTTGCATGAGTCACAACACAGATGGATTGTACAGCGCAAAGCGTTCAGCTGTTATTAGGGCATCAGATGATTTCTGGCCAAGAGACCCTGCATCCCACACAATTCACATTACATCAGTGGCTTACAATACTATTTTCCTTGGTGAATTTATGCAGCCAGACTGGGATATGTTTCATAGCCTACATCCAATGGCTGAATATCATGGTGCAGCACGAGCAGTGGGGGGATGTCCGATTTATGTGAGTGACAAGCCTGGGCACCATGACTTTGATCTTTTGAAGAAGCTTGCACTACCTGATGGTTCTATATTAAGGGCTAAACTTCCAGGAAGACCAACAAAGGATTGCTTATTTACTGATCCTGCTAGAGATGGAAAGAGTCTCTTGAAGATTTGGAACATGAATGATTTTGCTGGAGTTGTTGCGGTATTCAACTGCCAAGGAGCTGGGTGGTGTAAAGTTGGCAAGAAGAACCTCATCCATGATGAGAATCCAGGCACTGTCACAGGTGTCATTAGAGCTAAAGATGTTGACTATTTATCCAGGGTAGCAGATGATAAATGGACAGGAGACGCTATCATATATTCCCATGTTGGTGGAGAAGTGGTTTACCTTCCAAAGGATGCATCCATCCCAGTTACCTTGAAATCCCGAGAATATGAAGTTTTCACAATAGTTCCCGTGAAGGAATTGACCAATGGTGTCAAATTCGCTCCTATTGGTTTAATAAAGATGTTCAATTCAGGAGGAGCTGTCAAAGAGATCAGTTGGGGATCTAATGAAAGTACAGATGTAGCCATGAAAGTCCGTGGTTGTGGCCAATTTGGTGCTTATTCATCAGCTCGGCCTAAGTTGATAACAGTTGATTCAGAAGAGGTAGAATTCAAGTATGAGGACGAATCTGGATTGGTGACTATTGATTTGAGAGTACCTGAGAAAGAGTTATACCAATGGAGCATTTCTATTGATTTTTGA 2268 0.4409 MTVGAGISVADGNLMVLGNRVLSQVHDNIVVTPACGGALLNGAFIGVASHHKGSRTVFPIGKLQGLRFMCVFRFKMWWMTQRMGTCGQEVPIETQFLLVEADGGSDIDGGEDQAAATYAVFLPLLEGDFRAVLQGNDQNEIEICVESGCPAVEEFDGTHLVFIGAGSDPYEVITNAVKTVEKHLQTFAHRERKKMPDMLNWFGWCTWDAFYTNVTSENVKQGLQSLEKGGIPAKFVIIDDGWQSVGMDPNGIEWKSDSAANFANRLTNIKENHKFQKDGKEDQRVEDPALGLSHITNEIKVEHDIKYVYVWHAITGYWGGVKPGVTGMEHYDSKMTFPVSSPGVESNQPDEAFTTIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHITSVAYNTIFLGEFMQPDWDMFHSLHPMAEYHGAARAVGGCPIYVSDKPGHHDFDLLKKLALPDGSILRAKLPGRPTKDCLFTDPARDGKSLLKIWNMNDFAGVVAVFNCQGAGWCKVGKKNLIHDENPGTVTGVIRAKDVDYLSRVADDKWTGDAIIYSHVGGEVVYLPKDASIPVTLKSREYEVFTIVPVKELTNGVKFAPIGLIKMFNSGGAVKEISWGSNESTDVAMKVRGCGQFGAYSSARPKLITVDSEEVEFKYEDESGLVTIDLRVPEKELYQWSISIDF 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3615 755 Gene3D Aldolase class I 195 526 IPR013785 -
Ssu6g3615 755 PANTHER - 1 754 IPR008811 -
Ssu6g3615 755 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 1-RELATED 1 754 - -
Ssu6g3615 755 SUPERFAMILY (Trans)glycosidases 196 527 IPR017853 -
Ssu6g3615 755 Pfam Raffinose synthase or seed imbibition protein Sip1 7 738 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3615 Ssu-Chr6 79889620 79893858 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3615 1 753 Glycoside Hydrolase AT1G55740 72.354 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3615 K06617 - gmx:100785506 1489.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3615 6 79889620 79893858 Ssu6g3615 6 79889620 79893858 ECH