Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3606 ATGGCTAATTCTCTTGTAGAAGCTGTGATGTTAACCATTCCAGAACCACCATCCAAGAAGAATAATTGCAAGGATAAAGCCACAGAAAGAGATGACCCTCAGAATTCTGTCACCTTTGTTTATCAAGCCAAAGTAGCAGAATTATTACGAAGTGTAACAGTTTCATGGTGCAAGAACCCCACAGATCATTTCCTTTCCATGAACGTGGAAAACACTTTGGAAGAAAACAAGTACACCTGCAAGATTGATTTAGAATCCGGGCAGTCTTGGGGGAAAAAGGGTCTCAGATCATTTGAAATTGAAGGTGCAAGAGTAGACATTTTCTGGGATCTTCGAAAGGCGAAATTCTCCACGAGTCCACAGCCTTGCTCAGGTTATTACGTTGCCTTGGTTTACAAGAAAGAGGTGCTTTTGTTATTGGGGGATTTAAAGAAGGATGCTTATGATAGAACCAAATCAAAACCATCCTCAGAAGAGGCTACCTTGTTGTGCAAGAGAGATAATGTGTATGGGAAGAAGCTGTTTTGTACAAGAGCCATATTGGAAGATGGTAAAACAGAACATGATGTTGTCATTGAGACTTCCCTTTCTGGGCCTGATGATCCAGAAATGTGGATTAGCATAGATGGGATGTTGGCCAGTAGAATAATGAACTTGCATTGGAGATTCAGAGGGAATGAAATAGTGATGGTGAATAATTTGCCTGTGCAAATCTTTTGGGATGTGCATGATTGGCTGTTCAATGACCTTGGTTCAGGCCCTGCCTTCTTTGTTTTCAAGCCAGGCTTTTTGGAAACCATTAGCGATTCTAATAGCAGAGAATGCCCAAAAAGAAATGGGGATAGCAGCAGACATGAATTACTAGAGGAGAATTCATCCACCAAAGGTTATTGTCATTTTCTGTATGCTTGGAGAACGGCTTGA 924 0.4113 MANSLVEAVMLTIPEPPSKKNNCKDKATERDDPQNSVTFVYQAKVAELLRSVTVSWCKNPTDHFLSMNVENTLEENKYTCKIDLESGQSWGKKGLRSFEIEGARVDIFWDLRKAKFSTSPQPCSGYYVALVYKKEVLLLLGDLKKDAYDRTKSKPSSEEATLLCKRDNVYGKKLFCTRAILEDGKTEHDVVIETSLSGPDDPEMWISIDGMLASRIMNLHWRFRGNEIVMVNNLPVQIFWDVHDWLFNDLGSGPAFFVFKPGFLETISDSNSRECPKRNGDSSRHELLEENSSTKGYCHFLYAWRTA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3606 307 PANTHER EXPRESSED PROTEIN 1 306 IPR008586 -
Ssu6g3606 307 PANTHER KINESIN-LIKE PROTEIN (DUF868) 1 306 - -
Ssu6g3606 307 Pfam Plant protein of unknown function (DUF868) 33 305 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3606 Ssu-Chr6 79730967 79731890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3606 32 306 EF-hand Containing Proteins AT5G28150 34.783 3.06e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3606 - - gsj:114377104 518.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3606 6 79730967 79731890 Ssu6g3606 6 79730967 79731890 ECH