Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3597 ATGGACCTTGTCCCATACTCTGACCCAAACtctgtcgccaccaccaccaccccaccATGGCACGACATGTTCCGATCCGCATCTAGCCGAAAACCCACGACGCTTCCGCCGAATGCGGACCAAAAAGTCAACCCCTCCGGCGACTCTGAGGCGCGGCTCGCCCTCTACATAGCCATGGCCCACGCGGGCCTCGCCTTCGCcattctcatatttttctctctctacaaaCTCCTCCAGCAATACCTCAAACCCCTTCAATGGGCCGTCCTCTGTTCCATCCCTCTCAGACTCATTCACCAAACCATCGTTTCCTTTTGGTCTCACCCTCTCAAACTGGGCCTCACGCAAACCCTCCTCGCCCTCCCCCTCACCGTTTTCACCGTCTTCACCACCACCCTCGCCGAGATTCGCGAAGCTTCTTTCAGAATCCTTCTCAGGAAACCAAAGCCACAGAGTGAGAACCTCTCTTCAAAGAAGCGCAGCGGGTTTTCCACTTTGCTTCGTCTGCTCTTGTCCTTTGGGGTGTTCGTTGTTGCTTGTGAGAGACTTGGCGGTGTTGGGTCTCTGTCACTTCTCGGATTAGGCTTTGTTTTTAGTTCCAAGAATGTGGATTCCACTTTGCATCCCTTTAGGAGTGTTAGCCTCGGGCGTAGTGCAATTGGTGCGTTTTTCACCGAAGGGATATTGAGAAGGTTGAAAACACTTGTGGCTGTTGGGTTGATTGTTGGCATGATTGTTGGGTTCTTGAGCGGGGTGATATTCTTCTCTTATAAGATTGGAGGTGAAGGGAGAGGCGCGGTGGTTTCGCTGAAGTTGCGAGCGGAAGAGAGCAATTATGCTGAGAGAATTGGTGTGAAGAAGTGGATGGAGGAGAATGATGTTGCTGGAATGGTGGATAAGTACACTAGTCGGTTTTATGAGACGGTTTCTGATCAGATTGACGGGTTGGCAATGCAGTACAACATGACTGAATTTGTGACGGTTATTAAGCAGTTTGTGATAGCTGCTCCTGCTGATGCTAACTCTTCTCAGCCTTCGACGGTTTCATTAATGGTGCCTTCACCATACATGGAAAAGCTCTTGAGTTTGAAGGGTAGGGTTAGGAATAGGGAGTGGAGGGAGATTTATGCGGAACTTGATACCCTTTTCCGAGAGCTTATAATTACTAGGGAGGATTTGGTTGAGAGGGCAAAAGGGTTTGCGGTTAAAGGGATGGATGTTGGTCAACGTGTTTTGGCTAGTAGTACAACAAGTCTGCTTGGGAGTGGTATTAAGTTTGTGTTCTTCATTTTGAATTCCATAGTCTCTGGTGCTGCGGAGGTTTTCAATTTTGTGTCTCAGACAATGGTGTTTTTCTGGGTTTTGTATTACCTCATAACATCAGAGTCTGGTGATGTAACGGAACAAGTGATGCACATGCTTCCAATTTCAAACTCGGCTAGGGTCAGGTGTGTTGAGGTGTTGGATAAGGCTATTTCAGGAGTCCTTTTGGCCACTGCTGAGATTGCATTCTTCCAAGGGTGCCTGACTTGGCTTTTGTTTAGGCTATACAGAATACATTTCTTGTATGTGTCAACTATCCTTGCCTTCATTAGTCCTGTGCTTCCAATATTTCCATCTTGGCTTGCGACAATTCCAGCAGCATTACAGCTAGTGCTAGAAGGCAGATACATAGTGGCCGTTTTCTTGTCTGTTACTCACCTTTTCCTCATGGATTATGGGGCAACTGAAATTCTGGAAGATGTGCCTGGACACAGTGCATATCTTACTGGACTGAGCATCATTGGGGGAATGGCTTTGTTTCCATCAGCTCTAGAGGGGGCTATTATGGGGCCATTGATAACTACAGTCATGATTGCTCTGAAGGATTTATATGCTGAATTTGTTTTGGGCGAACCTGATGATAAGGTAGAACAGAAGACAAATTAG 1929 0.4609 MDLVPYSDPNSVATTTTPPWHDMFRSASSRKPTTLPPNADQKVNPSGDSEARLALYIAMAHAGLAFAILIFFSLYKLLQQYLKPLQWAVLCSIPLRLIHQTIVSFWSHPLKLGLTQTLLALPLTVFTVFTTTLAEIREASFRILLRKPKPQSENLSSKKRSGFSTLLRLLLSFGVFVVACERLGGVGSLSLLGLGFVFSSKNVDSTLHPFRSVSLGRSAIGAFFTEGILRRLKTLVAVGLIVGMIVGFLSGVIFFSYKIGGEGRGAVVSLKLRAEESNYAERIGVKKWMEENDVAGMVDKYTSRFYETVSDQIDGLAMQYNMTEFVTVIKQFVIAAPADANSSQPSTVSLMVPSPYMEKLLSLKGRVRNREWREIYAELDTLFRELIITREDLVERAKGFAVKGMDVGQRVLASSTTSLLGSGIKFVFFILNSIVSGAAEVFNFVSQTMVFFWVLYYLITSESGDVTEQVMHMLPISNSARVRCVEVLDKAISGVLLATAEIAFFQGCLTWLLFRLYRIHFLYVSTILAFISPVLPIFPSWLATIPAALQLVLEGRYIVAVFLSVTHLFLMDYGATEILEDVPGHSAYLTGLSIIGGMALFPSALEGAIMGPLITTVMIALKDLYAEFVLGEPDDKVEQKTN 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3597 642 MobiDBLite consensus disorder prediction 1 46 - -
Ssu6g3597 642 MobiDBLite consensus disorder prediction 8 45 - -
Ssu6g3597 642 PANTHER TRANSMEMBRANE PROTEIN C9ORF5 PROTEIN 1 636 - -
Ssu6g3597 642 Pfam AI-2E family transporter 429 621 IPR002549 -
Ssu6g3597 642 PANTHER TRANSMEMBRANE PROTEIN 1 636 IPR002549 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3597 Ssu-Chr6 79652767 79655032 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3597 - - gmx:100814206 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3597 6 79652767 79655032 Ssu6g3597 6 79652767 79655032 ECH