Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3594 ATGGGGTGGTTGGATTCACTGTGGAGAGAAGGACGAAAGCTTATTAAAAGGAAAGACAGTGATGCTGGCGATGCAGGTAGAGCACTGGAAGAACTCAGAGCTTCTCTCTACAATGAGATCCGAACCTCAGAAGGAGCCAAGCGTCAACAGCAAAGATATTGTGGACCAGTGGTGGCACTGTCCTTCAACTTTATGGTTGCAGTTGGGATTATCATGGCAAACAAATTGGTGATGGGTAAAGTTGGCTTCAACTTCCCAATTTTCCTCACATTTGTACACTATACCACTGCATGGCTTCTCCTTGCAATTTTCAAGGCACTATCAGTGCTTCCTGTGTCCCCTCCATCCAAAACAACTCCATTCTCTTCTTTATTTGCACTTGGTGCTGTTATGGCCTTTGCCTCTGGCCTTGCAAACACTAGCCTCAAGTATAACAGTGTTGGTTTCTACCAAATGGCTAAGATTGCTGTTACCCCAACAATTGTTCTTGCGGAGTTCATTCTTTTTAggaaaaacatttcttttaaaaagGTTTTGGCTTTGGCTGTCGTGTCAGCAGGTGTAGCTGTTGCAACTGTAACAGATTTAGAGTTCAATTTATTCGGTGCTCTAATTGCAATTGCTTGGATAGTCCCAAGTGgcataaataagattttatggTCTACTTTACAACAGCAAGGCAATTGGACAGCTCTGGCGTTGATGTGGAAGACAACCCCCATCACAGTTTTCTTCCTTGGGGCTTTGATGCCCTGGATAGATCCACCAGGAGTCCTGTCCTTCAAGTGGGATGTGAACAACTCAACTGCCATTTTGGTATCCGCTCTCCTTGGTTTTCTCTTGCAATGGTCAGGGGCCTTGGCGTTGGGGGCCACTTCTGCTACAACCCATGTTGTTTTAGGACAGTTTAAAACGTGTGTCATTCTGCTGGGAGGGTATCTATTATTCGACTCAGATCCTGGGGTTGTGAGCATCGGTGGTGCTGTTGTTGCTCTGTCTGGGATGTCAGTTTACACAACATTGAATTTGCAAGAGTCTCAGGAAAATACGAGCAAGCAGCTCCCAAAGCAAATTTTGCCTTCTTCGAAGCCGAAATCAACAAGTGAGGACAGCACAGATTTGAATGTAAATATTAACCCTACCACTATTGTCTGA 1155 0.4364 MGWLDSLWREGRKLIKRKDSDAGDAGRALEELRASLYNEIRTSEGAKRQQQRYCGPVVALSFNFMVAVGIIMANKLVMGKVGFNFPIFLTFVHYTTAWLLLAIFKALSVLPVSPPSKTTPFSSLFALGAVMAFASGLANTSLKYNSVGFYQMAKIAVTPTIVLAEFILFRKNISFKKVLALAVVSAGVAVATVTDLEFNLFGALIAIAWIVPSGINKILWSTLQQQGNWTALALMWKTTPITVFFLGALMPWIDPPGVLSFKWDVNNSTAILVSALLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGYLLFDSDPGVVSIGGAVVALSGMSVYTTLNLQESQENTSKQLPKQILPSSKPKSTSEDSTDLNVNINPTTIV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3594 384 MobiDBLite consensus disorder prediction 348 384 - -
Ssu6g3594 384 PANTHER OS06G0297600 PROTEIN 16 361 - -
Ssu6g3594 384 SUPERFAMILY Multidrug resistance efflux transporter EmrE 99 194 - -
Ssu6g3594 384 PANTHER SOLUTE CARRIER FAMILY 35 16 361 - -
Ssu6g3594 384 Pfam Triose-phosphate Transporter family 64 338 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3594 Ssu-Chr6 79608959 79611808 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3594 68 363 Organic Solute Cotransporters AT1G77610 24.430 6.58e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3594 - - gmx:100782555 649.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3594 6 79608959 79611808 Ssu6g3594 6 79608959 79611808 ECH