Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3593 ATGAGCGGCGGTGGTGGGTCTTCCAGTTTTAGGGTTCCGATCCCAAACAATGTACGCAAAATCATCCAAGACATCCGAGAGATCACCGGCAAGCAGCACACCGACGACGAAATCTACGCCGTCCTCCGAGAATGCTCCATGGATCCCAATGAGACCGCTCAGAAGCTTCTCTATTTAGATACTTTTCACGAGGTAAGAAGGAGGCGTGACCGAAAAAAGGAGGGATTGAGTGGCAGGGCTTCTGAAGAGTCTAGGTCAAAGCAAGGTGGACAAGGGAGGGGGGGAAGGGGTGCTTCTGGAGGATATTCCTCTAACTTTCCTGatggtggtggtgggagGAACCATGTTAATCGAAGGGAAAATGGAGTCAATTACATTGCAGAGAGAAGTCATGCTCCCTCTACCCAGCCAGTTTTGCAGAAAACTAAGACTAATACAACATCTCAAGCCACAAGAGTTTCAGCTGTTGCACCCCATGATGCTGCAAATCAATCCAATGGGAAGTCAGGTCATGGTTCTGCTGGCCAACCTTCCATGGTTAGTGTACCTAAAAGTAGTTCAGCTGCTAATGACACTGGCTATCAAGACGATGTCCAACCTCAAGCTGCTGCTGTTGCAGCAGCCTCTCCCCCTACACAAACCTTTGGCTCAGTTACCAGTACCGACAAAGGAAAGTCTCTGTCAAGTTCTGATCAACTTCAAACTTCTGTATCCGGTGTCCATTCCTCTTTGGATCCTGTAGTAGCTTCATCTGTCTCCTGGAATTCTGGTGTCAGCGGTGCTATTAGTAGCGAAGTTCGGAGCAACCGTATATCTGCTGGACCAAATCATGttaaaggaaataaagtttCTGTTCATGAAGTTAATGATTTATCAGCATCCAAGAATGAAAAATCTGGGTCCATGAATTCAACGAGCAAAACAAATGCTCCACAGAAGTCGAATGAAGTTGAAAATAATCGGTTATTTGAACCCTCACAACTTTCAACTCCTTCATCCCCAAATGATTCATTGAGGCCATCTTCTAGTTCTGGTAGCCAGCCACCTCTAgCTAATATCACAGAGGTTTCAACTTCAGAAACTTGTGTGCAATCTTCAGCAGAGTTGAGGCAACATGTTACTTTTCCAAACCATTTCCAAGTACCCAAGGCTTTAAAAAGTGGTCTGACATTTGGAAGCTTTGATTCTTTTGGCCCAAGTGAAAAATCTAACAGTGGAACTGGTGGTGACAATAATGCTTCTCCTGCTCTTGAATCTTCACTAGGGACTGACGAAGTTGCAACTTCAAGCAACCAAAGTGCATCATTGACTGCACAAGGAGATCATATCGATTATCCACATTCCTCTTcttatttgattgaaaagaCACCAGCTACAGAAGGCAATTCTATAACTGGTACTGACACAAAGGTTGATCAGCCAAAGAAGGTTTTGTTGGCTCCTGACGGCCATCAAATTCCGACTGTTCAAACTGCTCAAAACTATGGTTTGAATTTCATGTCCACCATGTTAGGCACTCAGCAAGTTCAATTTGAGGGAACTGAGCCTCAGTCACAAGATACATCTCGTTTTCCTAACTTTGTTAATGCAAGTTCTCAGGCTGTGTCCCCTAGCCCAACTCCACCCCTGCAGAGCTCTATACCTGTGTCTCCACAGTCGGTTTCTATTTTCAGGCCACCATACCCTGCTAACTTCTTCCCTTATGGCCACTACTACCCTCCAATTTATGTGTCTCCCATACACCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGCAACATGTATCTACCAGCAGCTGCTGGGATCAAATTCCCTCTCCCTCAATTCAAGGCTGGAGCGAACACAGGAAATGCGGCTCATATTGGAATTCCTTCTGGATCATTTATCACTCCACCTGTAGGATATGCACCTAGTCCAACAGTTAATCCTGGAAGCTCCACTGGAAGTGAAGATCTTGCAGTGTCTCAGTTGAAGGAAAACCAGATCTATACAACAGGACAACTGAGTGAAGGCTCTGCAGTGTGGATACCTGCACCAGGCCAAGACATATCCAGTTTGCAAGTTAATTCTCTGTATAACCTTACCCCTCAGGGACAACATCTCACCTTCCCCCCAACGCAGGCTGCTCATGGGCCATTTGCTGGTATCTATCAAGCAGGGCAGACAGTAGCTTCACCTTCAACCCTTTTACAACAGTCTCAGGCTGTGGCTGGGCCTGTTGAAACTGTAGGCCCCCCGTCAGGATCTTATCAGCAGCCTCAGCCTGCACAGATCAATTGGAATTCTAATTTTTAG 2307 0.4508 MSGGGGSSSFRVPIPNNVRKIIQDIREITGKQHTDDEIYAVLRECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGLSGRASEESRSKQGGQGRGGRGASGGYSSNFPDGGGGRNHVNRRENGVNYIAERSHAPSTQPVLQKTKTNTTSQATRVSAVAPHDAANQSNGKSGHGSAGQPSMVSVPKSSSAANDTGYQDDVQPQAAAVAAASPPTQTFGSVTSTDKGKSLSSSDQLQTSVSGVHSSLDPVVASSVSWNSGVSGAISSEVRSNRISAGPNHVKGNKVSVHEVNDLSASKNEKSGSMNSTSKTNAPQKSNEVENNRLFEPSQLSTPSSPNDSLRPSSSSGSQPPLANITEVSTSETCVQSSAELRQHVTFPNHFQVPKALKSGLTFGSFDSFGPSEKSNSGTGGDNNASPALESSLGTDEVATSSNQSASLTAQGDHIDYPHSSSYLIEKTPATEGNSITGTDTKVDQPKKVLLAPDGHQIPTVQTAQNYGLNFMSTMLGTQQVQFEGTEPQSQDTSRFPNFVNASSQAVSPSPTPPLQSSIPVSPQSVSIFRPPYPANFFPYGHYYPPIYVSPIHQFLSHNGFPQQPSAGNMYLPAAAGIKFPLPQFKAGANTGNAAHIGIPSGSFITPPVGYAPSPTVNPGSSTGSEDLAVSQLKENQIYTTGQLSEGSAVWIPAPGQDISSLQVNSLYNLTPQGQHLTFPPTQAAHGPFAGIYQAGQTVASPSTLLQQSQAVAGPVETVGPPSGSYQQPQPAQINWNSNF 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3593 768 MobiDBLite consensus disorder prediction 292 359 - -
Ssu6g3593 768 MobiDBLite consensus disorder prediction 399 444 - -
Ssu6g3593 768 MobiDBLite consensus disorder prediction 68 243 - -
Ssu6g3593 768 PANTHER GBF-INTERACTING PROTEIN 1-LIKE 2 768 - -
Ssu6g3593 768 MobiDBLite consensus disorder prediction 128 197 - -
Ssu6g3593 768 PANTHER FLOCCULATION PROTEIN (DUF1296) 2 768 IPR044277 -
Ssu6g3593 768 MobiDBLite consensus disorder prediction 399 447 - -
Ssu6g3593 768 MobiDBLite consensus disorder prediction 206 243 - -
Ssu6g3593 768 Pfam GBF-interacting protein 1 N-terminal 14 74 IPR009719 -
Ssu6g3593 768 SUPERFAMILY UBA-like 14 75 IPR009060 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3593 Ssu-Chr6 79596961 79605218 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3593 - - gmx:100819602 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3593 6 79596961 79605218 Ssu6g3593 6 79596961 79605218 ECH