Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3592 ATGGGTAGCAACGGTTTGAAGTATGAGATCGCACAAAACGCTTACATCAAACTCATCCTTCACTCCCTCAAACACCCTACCTCCGCCGTCAACGGCATCTTGATCGGCCGCATCTCCCCTTCCAACGACGTCGTCGAGATCGCCGATGCCGTCCCTCTTTTTCACTCTCACATCCCTCTTCTTCCCCAATTGGAGATATCTCTCATTCTgATAGAAGAATATTTTTCTGAGAAAGGGTTCAACATTGTGGGATATTTTCACGCGAATGAGAGATCCGATGACAGTGAGCTTGGTGGTGTGGCGAAGAATATTGGTGACCACATCTACCGCTACTTTCCCCAAGCCGCCGTTCTATTGTTAGATAACAAGAAACTTGATGCTTTGAAAAAGAGCAAGGACCGTAGTGCCATAATGCAGCTTTATGTTAGGGATACATCTAAGAACTGGAAGTTGGTTCAGTCAGATGGGAACAATCGATTCTCTCTCAAAGAGCCATCTGCAAATATAGTCTTAGTGGACTATATTGCATCTGAGAAATGGAATGACATTGTAGATTTTGATGATCATCTCGATGACATAAGCAAGGATTGGCTAAACCCAGGGCTCTTCAACTGA 615 0.4455 MGSNGLKYEIAQNAYIKLILHSLKHPTSAVNGILIGRISPSNDVVEIADAVPLFHSHIPLLPQLEISLILIEEYFSEKGFNIVGYFHANERSDDSELGGVAKNIGDHIYRYFPQAAVLLLDNKKLDALKKSKDRSAIMQLYVRDTSKNWKLVQSDGNNRFSLKEPSANIVLVDYIASEKWNDIVDFDDHLDDISKDWLNPGLFN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3592 204 PANTHER ER MEMBRANE PROTEIN COMPLEX 7 204 IPR005366 GO:0072546
Ssu6g3592 204 CDD MPN_UPF0172 10 199 IPR005366 GO:0072546
Ssu6g3592 204 Pfam Uncharacterised protein family (UPF0172) 7 201 IPR005366 GO:0072546
Ssu6g3592 204 ProSiteProfiles MPN domain profile. 8 139 IPR037518 -
Ssu6g3592 204 PANTHER ER MEMBRANE PROTEIN COMPLEX SUBUNIT 8/9 HOMOLOG 7 204 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3592 K23569 - gmx:100527135 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3592 6 79574872 79576940 Ssu6g3592 6 79574872 79576940 ECH