Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3591 ATGGCACAGGCACTCGGGTTCCTTGGTGACTTCAAATTAGGCCACTATATGAAAATTCCTCCAAAATCTATGTTCGTCGCGCAGTTGGTAGGTACCGTAGTTGCTTCGGGTGTATACTTTGGCACTGCATGGTGGCTTCTCACAACTGTTCCAGACATCTGTGACGAAACAAAATTGCCAAGTGGTAGTCCATGGACATGCCCTGGTGACGATGTGTTCTATAATGCTTCAATCATATGGGGAATAGTAGGGCCAAAGAGAATGTTTACCAAGGAAGGCATTTACCCTGCGTTGAATTGGTTTTTCCTCATTGGTCTCCTTGCTCCTGTACCAGTGTGGCTGCTTGCTCGCAAATTCCCCAACCACAGGTGGATTCAACTCATCAACATGCCCCTCATCATTTCTGGTCCTGGTGGTATCCCACCGGCCAGAGCCGTGAACTATATAACTTGGGGAATCGTTGGAATCTTCTTCAATTTCTATGTTTACAACAAGTTCAAGGCATGGTGGGCTCGACACACTTACATCCTCTCAGCAGCTTTAGACGCTGGAGTTGCTTTCATGGGTGTGCTGCTCTATTTTGCCCTCCAAAGTTACGATATTTATGGTCCAGTCTGGTGGGGTCAAGATGCTGATGACCACTGCCCTTTGGCCAGCTGCCCCACAGCTCCAGGCGTAATTGCTCGTGGATGCCCTGTTCTCTGA 705 0.4837 MAQALGFLGDFKLGHYMKIPPKSMFVAQLVGTVVASGVYFGTAWWLLTTVPDICDETKLPSGSPWTCPGDDVFYNASIIWGIVGPKRMFTKEGIYPALNWFFLIGLLAPVPVWLLARKFPNHRWIQLINMPLIISGPGGIPPARAVNYITWGIVGIFFNFYVYNKFKAWWARHTYILSAALDAGVAFMGVLLYFALQSYDIYGPVWWGQDADDHCPLASCPTAPGVIARGCPVL 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3591 234 PANTHER ISP4 LIKE PROTEIN 1 234 IPR004648 GO:0055085
Ssu6g3591 234 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 1 197 IPR004813 GO:0035673
Ssu6g3591 234 Pfam OPT oligopeptide transporter protein 1 195 IPR004813 GO:0035673
Ssu6g3591 234 PANTHER OLIGOPEPTIDE TRANSPORTER OPT FAMILY PROTEIN 1 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3591 Ssu-Chr6 79570482 79571270 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3591 1 234 Organic Solute Cotransporters AT5G55930 66.239 1.69e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3591 - - gmx:100776230 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3591 6 79570482 79571270 Ssu6g3591 6 79570482 79571270 ECH