Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3577 ATGGACAGCGGTGAATACAAATCATTGTTTGAGActaggagagagagaggaaggcACATGCGGCGGCTCTTTGCCATCTCTTTGTTTGTGGCCATATGCTTCATATGGGCTTATAGATTGAGCCACATACCCTCAAACGGGGAACATGGCAAATGGGCTTGGCTTGGTCTGTTTGCTGCAGAACTGTGGTCCGGCCTGTACTGGCTCTTCGGTCAAGCCCTCCGCTGGAACCTGGTGTTCAGAAAAACCTTCAACAACAGACTCTCTCAGAGATATGAGAGTAACTTACCAGGAGTGGACATCTTTGTGTTTACGGCAGAACCAGACATTGAGCCACCCATGATGGTAATTAATACAGTGTTATCTGTAATGGCTTATGACTATCCAGTTGAGAAGCTCAGTGTGTATCTCTCGGATGATGCTGGGTCAGATATCACTTTTTATGCTCTTTTAGAGGCTTCGACCTTTGCCAAGCATTGGGTGCCATTTTGCAAGAGATTTAAGGTGGAACCAAGGTCACCTGATGCTTATTTTAATACACTTGTCTCAACAATTCCACATGACCATAACTATGCCAAAGACTTGGCAGCCATCAAGaAATTATACAAAGATATGAAAAGGCGAATAGAAGATGCAATTAAGTTGGGTGGAGTACCCGTCAAAGCACGCTCAAAGCATAATGGATTTTCTCAATGGGATTCATATTCTTCTCGACATGATCACGACACAATCCTTCAAGTGGATTATACTTTCTcaactttttctataagtacaTATTTGAGAGAATTATATATCAacacatgttatttataa 813 0.3973 MDSGEYKSLFETRRERGRHMRRLFAISLFVAICFIWAYRLSHIPSNGEHGKWAWLGLFAAELWSGLYWLFGQALRWNLVFRKTFNNRLSQRYESNLPGVDIFVFTAEPDIEPPMMVINTVLSVMAYDYPVEKLSVYLSDDAGSDITFYALLEASTFAKHWVPFCKRFKVEPRSPDAYFNTLVSTIPHDHNYAKDLAAIKKLYKDMKRRIEDAIKLGGVPVKARSKHNGFSQWDSYSSRHDHDTILQVDYTFSTFSISTYLRELYINTCYL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3577 270 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN E1 7 247 - -
Ssu6g3577 270 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 7 247 - -
Ssu6g3577 270 Pfam Cellulose synthase 99 248 IPR005150 GO:0016020|GO:0016760|GO:0030244
Ssu6g3577 270 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 89 211 IPR029044 -
Ssu6g3577 270 Coils Coil 195 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3577 Ssu-Chr6 79402417 79404744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3577 7 247 Glycosyltransferase AT1G55850 52.869 1.09e-79 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3577 - - gmx:112999362 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3577 6 79402417 79404744 Ssu6g3577 6 79402417 79404744 ECH