Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3574 ATGGTGAAATTATTGAGCACGCCCCTGCTTCTTCTTCTTGGGGAGTACTCTCACTCCATCAACTTCGTGCAGCGTCACCCAAAACAGCCAGAGCTTGCAAGAGATGCGTTGAATTCAGATGGCTACTGTGTAATTGGAGGTTACATGTCTCCTGTGAATGATGCATACAAGAAAAAGAGCCTAATATCTGCTGAACATCGACTACGATTATGTCATTTAGCCTGCAAAAGTTCAGATTTTGTAATGGTTGATCCATGGGAGGTAAATTACTCTTTCTTTCTGCTAGATTGCACTCAACGCACTTTAACTGTTCTCTCCAGAGTCCACGGTTCTTTTTGTGAGACAGGGTTGGTATCTAGAGAATCCCTCAAGGTCATGCTTCTCTGTGGTTCTGATCTCCTTCATTCTTTTGGCATTCCTGGATTCTGGATTCGTGACCAGGTTGAAACTATATGCAGAGATTATGGAGTAGTCTGCATTCGCAGAGAAGGACAAGATGTTGAGAAGACTATATCCGAAGATGAAATTCTGAATGAGAATCAGGAAAATATCAAGGTTGTGGATGAACTTGTACCAAATCAAATTAGCTCAACTAGAGTAAGGGATTGCATTGCAAGAGGATTATCAATAAAATACCTTACTGCGGATGAAGTGATTGATTATATCAGGGAGCAACAATTATACTTGAACTTAGATGATAAGTAA 705 0.4057 MVKLLSTPLLLLLGEYSHSINFVQRHPKQPELARDALNSDGYCVIGGYMSPVNDAYKKKSLISAEHRLRLCHLACKSSDFVMVDPWEVNYSFFLLDCTQRTLTVLSRVHGSFCETGLVSRESLKVMLLCGSDLLHSFGIPGFWIRDQVETICRDYGVVCIRREGQDVEKTISEDEILNENQENIKVVDELVPNQISSTRVRDCIARGLSIKYLTADEVIDYIREQQLYLNLDDK 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3574 234 PANTHER NICOTINAMIDE-NUCLEOTIDE ADENYLYLTRANSFERASE 26 231 - -
Ssu6g3574 234 Gene3D HUPs 24 233 IPR014729 -
Ssu6g3574 234 Pfam Cytidylyltransferase-like 28 201 IPR004821 GO:0003824|GO:0009058
Ssu6g3574 234 PANTHER NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE 26 231 - -
Ssu6g3574 234 SUPERFAMILY Nucleotidylyl transferase 31 230 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3574 K06210 - gmx:100793809 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3574 6 79360943 79365926 Ssu6g3574 6 79360943 79365926 ECH