Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3570 ATGGCCAGCTCCACCTTCCTCTGCCCCGTAGCATTTAACTTCTCACAGAAACCGCTTCAATCCACCTTTCTGCATTCCTCCCCAAACCCCTCTCTTCTCACTCTGAACATTCTTCcaaagaaattgagaaaatcCCACCAACTCAGAAGCCTTATAGTGGCCAAATCCAATGGCAGTGACTCTGCCGATGTTCCTGACCGTTTGATTTCCGCCCTTTGTTACTTCTACCCTTTCTTTGATGGTATACAGTATGGAAAATACGTAATCACTCAGTTCTACCCTGTTCAAGCCATTGTTCAACCGTTGGTTCCTGCAATACAAGTTTTCAAAAGCTTCCCCTTTAACGGGTTCCTGGTGTTTATGACCctttattttgttgtggtgagaAACCCCAATTTCAGTAGATATGTGAGGTTCAACACTATGCAAGCCATTGTCCTTGATGTGCTGTTGATTTTCCCTGACCTCTTGGAAAGGGGGTTTAATCCCAGAGGTGGGTTGGGGTTGGATTTGATGATGAGTTTGGACAGTACTGTGTTCTTGTTCCTCTTGGTGTGCTTggtttatggttcttcctcttGCTTGCTGGGTCAACTTCCCAGATTACCCATTGTTGCTGAGGCAGCGGATAGGCAGGTTCTTTGA 645 0.4233 MASSTFLCPVAFNFSQKPLQSTFLHSSPNPSLLTLNILPKKLRKSHQLRSLIVAKSNGSDSADVPDRLISALCYFYPFFDGIQYGKYVITQFYPVQAIVQPLVPAIQVFKSFPFNGFLVFMTLYFVVVRNPNFSRYVRFNTMQAIVLDVLLIFPDLLERGFNPRGGLGLDLMMSLDSTVFLFLLVCLVYGSSSCLLGQLPRLPIVAEAADRQVL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3570 214 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 15 213 IPR005691 -
Ssu6g3570 214 Pfam Chloroplast import apparatus Tic20-like 67 209 IPR005691 -
Ssu6g3570 214 PANTHER PROTEIN TIC 20-V, CHLOROPLASTIC 15 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3570 Ssu-Chr6 79323090 79323734 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3570 - - gmx:100777912 390.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3570 6 79323090 79323734 Ssu6g3570 6 79323090 79323734 ECH