Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3561 ATGTCGTTGGGAATTCTTCGGTCGCGAGCCATTTCATTGGCATCGAAGCGATTTCTCTGCACCAATGCGGCCTCCGCTCCTCTTCCCCCTCCTCCATTCCGCGCCTCCCCAAGCCGCTGGAACTTCCTCAAATACGCCGTCGTCGGCGCTCTCACCGGAGCCACTGGCCTCGCCGGTTACGCCTCTTACGCTTACAGCTTGGAAGAAGTAGATGAGAAAACGAGGTCGTTCCGCGAATCGGCCAAGTACACTGCTGGTGATGGAGCCACTGCTCTTGAGAAATTTCAAGGTTTGCTATACTCAACTGCAATGACAGTGCCTGCAAAAGCGGTACAGCTTTATTTGGATGCAAGAAGGCTAATTGAAGAACAAGTTAAGAGTTATACTGAACCATACACAGACAAGCTCCTTCCTGATTTGCTTCCTCAGGAGCAACATGTGTTTACACTTGTTCTTGATCTCAATGAGACATTGATTCACTATATTTGGACGCGAGATACAGGTTGGCAGACTTTTAAAAGACCTGGAGTTGATGCTTTCTTGGAACATTTAGCTCAGTTCTATGAAATAGTGGTGTATACAGATGAACAAAATATGTTTGTAGACCCTGTTATAGAAAGGCTGGATACCAAGCATTGCATTAGATATAGGCTATCGAGGCCAGCTACTAAGTATCAAGATGGGAAACACTTCAGAGACCTTTCAAAACTAAACAGAAATCCAGCAAAAGTTCTTTATTTAAGTGGCCATGCTTTGGAAACTTGCCTACAGCCTGAAAACTGTGTCCCTATCAAGGCATGGCAGCAGCAAGATATAGATGACGCAGCTCTGTTGGATTTTATACCATTTCTTGAGTTTGTTGCCCGTAGTAGTCCACCTGATATAAGACCAGTGCTAGCCTCGTACCAAGGATGTGATATTCCAAGTGAATTCATCAGGCGTTCCAAAGAGCATCAGAGGAGAATGCAAGAACAAAAGCCTCGTGGTCGCTTCTGGAAATGA 1002 0.4571 MSLGILRSRAISLASKRFLCTNAASAPLPPPPFRASPSRWNFLKYAVVGALTGATGLAGYASYAYSLEEVDEKTRSFRESAKYTAGDGATALEKFQGLLYSTAMTVPAKAVQLYLDARRLIEEQVKSYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDTKHCIRYRLSRPATKYQDGKHFRDLSKLNRNPAKVLYLSGHALETCLQPENCVPIKAWQQQDIDDAALLDFIPFLEFVARSSPPDIRPVLASYQGCDIPSEFIRRSKEHQRRMQEQKPRGRFWK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3561 333 SUPERFAMILY HAD-like 135 300 IPR036412 -
Ssu6g3561 333 SMART forpap2 146 274 IPR004274 -
Ssu6g3561 333 PANTHER OS05G0513200 PROTEIN 22 325 - -
Ssu6g3561 333 Pfam NLI interacting factor-like phosphatase 149 295 IPR004274 -
Ssu6g3561 333 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 22 325 - -
Ssu6g3561 333 CDD HAD_FCP1-like 148 264 - -
Ssu6g3561 333 Gene3D - 132 317 IPR023214 -
Ssu6g3561 333 ProSiteProfiles FCP1 homology domain profile. 143 287 IPR004274 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3561 K17496 - gmx:100803155 608.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3561 6 79218130 79222201 Ssu6g3561 6 79218130 79222201 ECH