Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3525 atggcgaTGCTTCATCCCCTCACAAACCCAAACGAGCTTCTCTCACTCTCGTGCTCTTCCATCCACCACCACAATGCACTCGGAACCTCTCTTTCTCTGAACCCCAGAACCACAAGAATTGCCCCGCAACGCCTCAGTCGTCGTTTCGCCTCCGTCAGATGCTCCTACGCTTACGTAGATAACGCCAAGATTAAGGTTGTCGGCATTGGTGGCGGCGGCAACAATGCCGTTAATCGCATGATCGGTAGTGGTTTGCAGGGCGTAGACTTTTATGCGATAAATACTGATGCTCAGGCCCTGTTAAATTCTGCTGCTGAAAACCCTATTAAAATTGGAGAAGTTTTGACTCGTGGATTAGGTACCGGTGGGAATCCACTTTTGGGGGAACAAGCTGCAGAGGAATCTAGAGAAGCTATTGCTGATGCTCTTAAAGGATCTGATATGGTGTTCATTACAGCTGGGATGGGTGGGGGAACGGGGTCTGGTGCTGCCCCAGTTGTGGCCCAAATATCAAAAGAGGCAGGTTACTTGACTGTAGGTGTCGTTACCTATCCCTTCAGTTTTGAAGGACGTAAAAGATCCTTGCAGGCAGGTGCCTTTGAAGCCATCGAAAGGCTGCAGAAAAACGTCGATACACTTATAGTGATTCCAAATGACCGTCTGCTTGACATAGCTGATGAGCAGATGCCTCTTCAGGATGCTTTCCGTCTTGCAGATGATGTTCTACGCCAAGGAGTACAGGGAATATCTGACATTATAACAGTACCTGGACTTGTCAATGTGGATTTTGCTGATGTAAAAGCTGTGATGAAAGACTCTGGGACTGCAATGCTTGGAGTAGGTGTTTCCTCGTCAGCTACTGGGGTAGTGTATAATATTACTGGAGGAAAGGACATAACCCTACAGGAAGTGAATAGGGTGTCTCAGGTGGTGACTAGTTTGGCAGATCCTTCTGCTAATATTATATTTGGGGCTGTCGTTGATGATCGCTACACTGGGGAGATTCATGTCACTATAATTGCAACTGGCTTCTCGCAGTCTTTTCAGAAGAAATTGCTAACAGATCCAAGGGCTGCAAAGCTGCTTGACAAAGTGGCTGAGGGGCAACAAAGCAAGGCACCCCCTCCTCCCCTTAAGTCCTCAAACAAGGTTGAATCTAGAGCATCCCCGCGAAAGCTCTTTTTTTAG 1188 0.4731 MAMLHPLTNPNELLSLSCSSIHHHNALGTSLSLNPRTTRIAPQRLSRRFASVRCSYAYVDNAKIKVVGIGGGGNNAVNRMIGSGLQGVDFYAINTDAQALLNSAAENPIKIGEVLTRGLGTGGNPLLGEQAAEESREAIADALKGSDMVFITAGMGGGTGSGAAPVVAQISKEAGYLTVGVVTYPFSFEGRKRSLQAGAFEAIERLQKNVDTLIVIPNDRLLDIADEQMPLQDAFRLADDVLRQGVQGISDIITVPGLVNVDFADVKAVMKDSGTAMLGVGVSSSATGVVYNITGGKDITLQEVNRVSQVVTSLADPSANIIFGAVVDDRYTGEIHVTIIATGFSQSFQKKLLTDPRAAKLLDKVAEGQQSKAPPPPLKSSNKVESRASPRKLFF 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3525 395 Gene3D Tubulin/FtsZ, GTPase domain 56 270 IPR036525 -
Ssu6g3525 395 TIGRFAM ftsZ: cell division protein FtsZ 60 285 IPR000158 GO:0003924|GO:0005525
Ssu6g3525 395 ProSitePatterns FtsZ protein signature 1. 94 128 IPR020805 GO:0005525
Ssu6g3525 395 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 285 395 - -
Ssu6g3525 395 SMART Tubulin_C_4 259 353 IPR018316 -
Ssu6g3525 395 PRINTS Cell division protein FtsZ signature 241 263 IPR003008 GO:0005525
Ssu6g3525 395 PRINTS Cell division protein FtsZ signature 264 285 IPR003008 GO:0005525
Ssu6g3525 395 PRINTS Cell division protein FtsZ signature 148 168 IPR003008 GO:0005525
Ssu6g3525 395 PRINTS Cell division protein FtsZ signature 176 197 IPR003008 GO:0005525
Ssu6g3525 395 SUPERFAMILY Tubulin C-terminal domain-like 259 352 IPR008280 -
Ssu6g3525 395 Gene3D - 271 357 IPR037103 -
Ssu6g3525 395 PANTHER CELL DIVISION FTSZ-LIKE PROTEIN 1 284 - -
Ssu6g3525 395 Pfam Tubulin/FtsZ family, GTPase domain 63 225 IPR003008 GO:0005525
Ssu6g3525 395 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 285 395 IPR045061 GO:0003924|GO:0005525
Ssu6g3525 395 MobiDBLite consensus disorder prediction 364 395 - -
Ssu6g3525 395 PANTHER CELL DIVISION PROTEIN FTSZ-RELATED 1 284 IPR045061 GO:0003924|GO:0005525
Ssu6g3525 395 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 156 162 IPR017975 GO:0005525|GO:0005874|GO:0007017
Ssu6g3525 395 SUPERFAMILY Tubulin nucleotide-binding domain-like 62 260 IPR036525 -
Ssu6g3525 395 CDD FtsZ_type1 76 343 IPR000158 GO:0003924|GO:0005525
Ssu6g3525 395 SMART Tubulin_4 63 257 IPR003008 GO:0005525
Ssu6g3525 395 Hamap Cell division protein FtsZ [ftsZ]. 59 389 IPR000158 GO:0003924|GO:0005525
Ssu6g3525 395 Pfam FtsZ family, C-terminal domain 284 344 IPR024757 -
Ssu6g3525 395 ProSitePatterns FtsZ protein signature 2. 147 168 IPR020805 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3525 Ssu-Chr6 78406113 78408644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3525 K03531 - gmx:100808722 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3525 6 78406113 78408644 Ssu6g3525 6 78406113 78408644 ECH