Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3493 ATGGATCTCCTGAGAGTAGACACATACAACGTTACGAAGGAGATCAGAAACGGTTGCAGTCTTCTGCCATCAGATATTGGACTTGTGTACAATAACTCAACGAAGATAGAGGGGTCTAATAATGTGTACACCATCTATGCTAGATTGAACCTTCCTTCTGAGGTGTACAACGTTACACGGCTCAACCATGTGTGGCAAGTTGGGTATCACATTGAAGATGGCCGTCCCCAGCGCCATCCAACAACTCTTCGGAACGTGGACAGCACAGAGGTCATAGACTTGACTTCTACCATCGGTCAAAGCACTGGACAGTACCGGAGTTATCTTAGATCGGTACATGGAGTCCTAAACATTATCGGGTGGGGAACACTGTTGCCGATTGGAATTATAATTGCAAGATACTTTCGAGTGTTTCCTTTTAAATGCGAGCCAATGTGGTTTAACCTGCACATTGGTTGCCAATTAACTGGTTTTCTCGTTGGCACCGCTGGATGGGCTATTGGACTAAGTCTCGGACATTCTTCAAGATACTACACCTTCCACGCTCATCGAACCTTTGGCATTCTCATATTCACGTTTAGCACAGTACAGATGTTGGCTTTTCGCTTAAAGCCGAAGGTGACGGATGATTACCGGAAATATTGGAATATGTACCATCATTTTCTTGGTTATGGACTGTTGGCTATCATATTCATAAACATATTCAAAGGAATTCGCATTTTGGAAGGGGGTGACGCATGGAAGTGGGGATACATTGGAAATCTTGCTTTCTTGGGTGCCATCGCATTTGTTTTGGAGGTTTTCACATGGATTCGCTTCTTCATGTGGAAGCACAAGACAAATGAAGCAAGCAAACATAATAAGCCAGCCAGCAGCAGACACAGCTGA 888 0.4426 MDLLRVDTYNVTKEIRNGCSLLPSDIGLVYNNSTKIEGSNNVYTIYARLNLPSEVYNVTRLNHVWQVGYHIEDGRPQRHPTTLRNVDSTEVIDLTSTIGQSTGQYRSYLRSVHGVLNIIGWGTLLPIGIIIARYFRVFPFKCEPMWFNLHIGCQLTGFLVGTAGWAIGLSLGHSSRYYTFHAHRTFGILIFTFSTVQMLAFRLKPKVTDDYRKYWNMYHHFLGYGLLAIIFINIFKGIRILEGGDAWKWGYIGNLAFLGAIAFVLEVFTWIRFFMWKHKTNEASKHNKPASSRHS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3493 295 PIRSF UCP037471 6 295 IPR017214 -
Ssu6g3493 295 Pfam Protein of unknown function (DUF568) 5 94 IPR045265 -
Ssu6g3493 295 Gene3D - 93 282 - -
Ssu6g3493 295 CDD Cyt_b561_FRRS1_like 88 267 - -
Ssu6g3493 295 SMART 561_7 112 238 IPR006593 -
Ssu6g3493 295 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 4 288 - -
Ssu6g3493 295 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 4 288 - -
Ssu6g3493 295 ProSiteProfiles Cytochrome b561 domain profile. 75 274 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3493 Ssu-Chr6 77840076 77843483 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3493 - - gmx:100791697 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3493 6 77840076 77843483 Ssu6g3493 6 77840076 77843483 ECH