Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3454 ATGAAGTTTCCCGGCGAGGCGAGTTTTCCGGCGGGCATTGCTTCGAGGACCGTGAACCCTTCGCCGGACTCAGATCTTCAGCCAGCGAAGCCCTTTCCACGGCGGAGACCGAGAACTCCGGGGACCCGGTTGAGGAGACACGGTGGCAAACGGAGCAGACCCGAAACTCCTCTGTTGAAGTGGAAGATCCATGACGATCCACTCGAAGAAGACCAGAAGTCTTCCGTCGCGGGGTTCCGCCGGAGAACGTGCCGGACCGCGAAGAAGCAAACGGTGGTCGCCATGTCGGCGCGGAGACTCGCCGCCGGACTGTGGCGATCATGGCAGTTggttttctatattaatttgataGGTTTCCGTTTTTTACTTGCTACTGATGTCACTTATCTGCAGCATGGAATTGGTCACGCAGGCCTCCAGTTCCTTGGTCATCCACCAAATGGCGTGACCCATGATTCTGATATGAGGAAGAATCTTTCTCAAAGTCCCCGTTCCATATTTGGGACAAAGAATGGACACTTCTGTGAGCCTGAACCTTTCCAGTTTACCAACACTGAAATGGAGGGTGCAACAAAATGGGATCCTTTATGCTTAAAAACATCAGATGAGGCGCAGCATATCTATAGCCACATAAAACTTCTCGACCAAAAGGCAAGTGCTGTATCTGTTGTATCTGCTCTCGGAGCTGAACTAGAGCAGGCTCGAGCACGAATTCAGGAGCTTGAGACTGAACACCGCTCCTCCAAAAAGAAGCTTGAGCATTTCCTGAAGAAAGTCAGTGAGGAAAGGGCCCAATGGAGAAGCAGAGAGCATGAGAAAATCCGTGCATACATTGATGACGTTAAAGCAGAGTTAAATCGAGAAAGGAAAAATCGCCAGAGGATTGAAATTGTCAATTCGAGTTGGTAA 909 0.4972 MKFPGEASFPAGIASRTVNPSPDSDLQPAKPFPRRRPRTPGTRLRRHGGKRSRPETPLLKWKIHDDPLEEDQKSSVAGFRRRTCRTAKKQTVVAMSARRLAAGLWRSWQLVFYINLIGFRFLLATDVTYLQHGIGHAGLQFLGHPPNGVTHDSDMRKNLSQSPRSIFGTKNGHFCEPEPFQFTNTEMEGATKWDPLCLKTSDEAQHIYSHIKLLDQKASAVSVVSALGAELEQARARIQELETEHRSSKKKLEHFLKKVSEERAQWRSREHEKIRAYIDDVKAELNRERKNRQRIEIVNSSW 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3454 302 Coils Coil 278 298 - -
Ssu6g3454 302 MobiDBLite consensus disorder prediction 36 50 - -
Ssu6g3454 302 Coils Coil 224 258 - -
Ssu6g3454 302 PANTHER GB|AAF24581.1 1 300 IPR043424 -
Ssu6g3454 302 MobiDBLite consensus disorder prediction 1 58 - -
Ssu6g3454 302 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 1 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3454 Ssu-Chr6 77278912 77281488 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3454 - - gmx:100799140 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0929 9 38983686 38987955 Ssu6g3454 6 77278912 77281488 PCT