Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3453 ATGCAGGATTATGAGAAGGAAAGGAAGGGCAGAGAATTGATAGAGGAAGTGTGTGATGAGCTAGCCAAGGAAATTGGAGAAGACAAGGCCGAAGTTGAAGCATTGAAGAGGGAATCTATGAAACTCAGGGAAGAAGTGGAAGAGGAGAGGAAGATGTTACAGATGGCTGAAGTATGGCGTGAAGAACGTGTTCAAATGAAGTTGATAGATGCAAAAGTTGCTCTTGAAGAGAAGTACTCACAGATGAATAAACTTGTTGCGGATTTGGAAACTTTTATCAAGTCAAAAAGTGCGGATCCAAACTCAAAGGAGATGAGAGAGGCAGAATCACTTCAACAGGCTGCAGCTGCAATGAACATTCAAGACATCAAGGGATTTTCATATCAACCCCCTAACTCCGATGACATTTTGCCATTTTTGAAGATGCAAATTTTGGTGAAGCAAATGAGAGGGAGATTGAACCATGTCTTTCTCACAGTCCTACTAGTCATGCCTCGAATATTCACATGGTGA 513 0.4172 MQDYEKERKGRELIEEVCDELAKEIGEDKAEVEALKRESMKLREEVEEERKMLQMAEVWREERVQMKLIDAKVALEEKYSQMNKLVADLETFIKSKSADPNSKEMREAESLQQAAAAMNIQDIKGFSYQPPNSDDILPFLKMQILVKQMRGRLNHVFLTVLLVMPRIFTW 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3453 170 Coils Coil 18 52 - -
Ssu6g3453 170 PANTHER ACTIN CYTOSKELETON-REGULATORY COMPLEX PAN-LIKE PROTEIN 1 137 - -
Ssu6g3453 170 PANTHER GB|AAF24581.1 1 137 IPR043424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3453 Ssu-Chr6 77278361 77278873 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3453 - - gmx:100795388 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3453 6 77278361 77278873 Ssu9g0929 9 38983686 38987955 ECH
Ssu6g3453 6 77278361 77278873 Ssu6g3453 6 77278361 77278873 ECH