Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3451 ATGGCGAACTCTGAAGTGCCTTCATTTTCCCTAGGTCTCGATCTGGCTCTCGACACGCCCCCGCATTCCCCGATCAATCCACCCCTTTCTCCCGCCCCACACGTCTCCGACTCCGATCCCGAAACCCGACCCGACCCGCCGCGCCCTATCCTCAAACGCCTCCGCCGCGGTCCCCCGCCGCCGCCGTTCTTCGACGCCGACGAGATCGAGGAGTTCTCCTCCGAGGACGATCCCGATCAAGTGCACGCGCTTCCATCGGCGTGGAATCGTTCTGTGTGTAGCACCTCAAAAGTGTCGTTGAATGGTTCTGGAGTTTTGACTCCTCATTCGTGTAGCAACTCtagggagagaaaaagaaaggaagctTCGGATGATGTTCCGGCTTCTGCTAGGTTAGAGACAGGGAAGAGTGGGTTGATGTTTCCCAAGTTAACGACTAGTCCTCTTCGTAGGTTTCAATTGCTGGATTCGGATTCTGATGATTCATATGTTGATCTTGATGTTGGTGGTGCTGATGAAGTTAACCCTAACAGTCatttagaacaaaataagaaaacatcGTTTGATGCGAACGGGAATCAGGATCTGTGGAAGGATTTTTTGCCGGGGAAGAATGTTTCTGTCCCGACGCCGGCCTTCAATGAGTTGTGTGAAGAGTACTTTCGTTCTGCCAAGTGCAAGGAAGTGAGGGGTGATGTGAATGAAAGTCATAATGAGAGGTATCCTGGGGTTAGTTCTAGCTGCCACAGGGATCAACAACAGCAATGGGAATCCACGGACCCTGTTCATCCTGCTCATCGCTATTTTTTCCATGAGGATCTGAGAATTCAGCAGTTAGTTCGCTGTCGCTTGCAGAATTTTAATCCACTAGGTGTTGTCAACAGAGTGAATCAGCAACCTAATGTCTCACACATTGATTACATGGGACAATTTGGCAATGGAGGAGCTTCAAACATGCAGGGAGTTCAAAATGGTTGTGTTAACAGCTCAACAAGGGGAAAAAACAAATCAAGTAATTTGGGTGTTGGGGTGTCTTTTAATGCTTCTGGAGGCTGGGTGGATCCGAAAATTGTTTCTTCATTTAGCCATGGGGAATCTTCTAGAAAGAAAGCAACAAAGAGAAATAGCACTAAGAATGGTGtctcaaaaagtaaaaataaagcaaacaacCTATCATGTGCTCCTGCGGAGTGGGTGGAACCCAAGAGCTGTGCCAGTTTGCCAAAGGATGCAGGCAAAAGACGTGTTCAAGCAAGTGGTCAATCTGCTGGTCATTGGTATACATCACCAGAAGGAAGAAAGGTTTATGTCAACAAAAGTGGGCAGGAGTTGACAGGAAAGGGTGCTTATAGACAATACCGGAAGGAGAGTGGAGCAGGattcaagaaatcaagaaagaaaacaGGTGCCAAGAAGACAAATGCCAAGAAGAGAAACTGA 1440 0.4562 MANSEVPSFSLGLDLALDTPPHSPINPPLSPAPHVSDSDPETRPDPPRPILKRLRRGPPPPPFFDADEIEEFSSEDDPDQVHALPSAWNRSVCSTSKVSLNGSGVLTPHSCSNSRERKRKEASDDVPASARLETGKSGLMFPKLTTSPLRRFQLLDSDSDDSYVDLDVGGADEVNPNSHLEQNKKTSFDANGNQDLWKDFLPGKNVSVPTPAFNELCEEYFRSAKCKEVRGDVNESHNERYPGVSSSCHRDQQQQWESTDPVHPAHRYFFHEDLRIQQLVRCRLQNFNPLGVVNRVNQQPNVSHIDYMGQFGNGGASNMQGVQNGCVNSSTRGKNKSSNLGVGVSFNASGGWVDPKIVSSFSHGESSRKKATKRNSTKNGVSKSKNKANNLSCAPAEWVEPKSCASLPKDAGKRRVQASGQSAGHWYTSPEGRKVYVNKSGQELTGKGAYRQYRKESGAGFKKSRKKTGAKKTNAKKRN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3451 479 MobiDBLite consensus disorder prediction 1 67 - -
Ssu6g3451 479 PANTHER RHO GTPASE-ACTIVATING PROTEIN 359 479 - -
Ssu6g3451 479 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 356 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 464 479 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 112 127 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 102 134 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 359 390 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 410 432 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 447 479 - -
Ssu6g3451 479 MobiDBLite consensus disorder prediction 38 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3451 Ssu-Chr6 77267233 77269578 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3451 - - ccaj:109788794 647.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3451 6 77267233 77269578 Ssu6g3451 6 77267233 77269578 ECH