Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3441 ATGGAACTCAAACTGCTTCTGCTTCTGATTCTAACGCTTCTTTTTGCAACTGCCACGGCTGAATACGTTCGCCCTCTGCCTAGAAAAACCTTAACCATCCCATGGGATTCAATTTCCAAGGCCAACTCTTACCCCCAGCAGGTACACATTTCTTTGGCAGGAGACAAGCACATGAGAGTGACCTGGATAACCGATGATAAACATTCACCTTCATATGTAGAATACGGAACATTACCCGGGAGGTATGACTCAATAGCTGAAGGAGAGTGCACCTCTTATAATTATCTGTTATATAGCTCGGGAAAGATACACCACGCTGTAATTGGGCCTTTGGAAGACAATACTTTGTACTTTTACCGGTGTAGTGGAAAAGGTCCTGAGTTCAAGCTCAAAACCCCTCCAGCTCAATTTCCTATTACTTTTGCTGTGGCTGGGGATCTGGGTCAAACTGGTTGGACTAAATCAACATTGGCTCACATTGACCATTGCAAATATGATGTCTACCTGCTTCCAGGAGACCTTTCATATGCTGATCGTATGCAGCATCTGTGGGACAATTTTGGGAAACTAGTGGAGCCACTTGCTAGTACAAGGCCATGGATGGTAACAGAGGGAAACCATGAAGAGGAGAACATACCATTGTTAACGGATGAGTTTGTTTCCTATAATTCCAGATGGAAAATGCCATTTGAGGAAAGTGGATCAACTTCAAATCTCTATTATTCTTTTGAAGTTGCAGGTGTCCACGTTATCATGCTTGGCTCCTATGCAGATTATGATGAGTACTCTGAACAATATAGATGGCTAAAGGAAGATCTGTCAAAGGTGGATAGGAAAAGGACACCTTGGCTACTTGTGTTATTTCATGTGCCATGGTATAATAGCAACAAGGCTCATCAAGGTGCAGGGGATGATATGATGGCAGCTATGGAGCCATTGCTTTATGCTGCTAGTGTTGACTTAGTTATCGCTGGTCATGTTCATGCTTATGAACGTTCAAAACGTGTGTATAATGGAAGATTGGATCCCTGTGGTGCCGTCCATATAACTATTGGTGATGGAGGAAACAGAGAAGGCTTAGCTCATAGGTATATAAACCCACAGCCAAAGTGGTCAGAATTCCGCGAAGCCAGTTTTGGTCATGGTGAGCTGAAGATTGTAAACTCCACTCATGCCTTCTGGAGTTGGCACAggaatgatgatgatgagtcaGTAAAAGCTGATGATATCTGGATAACCTCTTTGGTAAGCTCAGGATGTGTTGATCAGAAGACACATGAACTCAGAAGCACACTTATGACACCCTAA 1308 0.4266 MELKLLLLLILTLLFATATAEYVRPLPRKTLTIPWDSISKANSYPQQVHISLAGDKHMRVTWITDDKHSPSYVEYGTLPGRYDSIAEGECTSYNYLLYSSGKIHHAVIGPLEDNTLYFYRCSGKGPEFKLKTPPAQFPITFAVAGDLGQTGWTKSTLAHIDHCKYDVYLLPGDLSYADRMQHLWDNFGKLVEPLASTRPWMVTEGNHEEENIPLLTDEFVSYNSRWKMPFEESGSTSNLYYSFEVAGVHVIMLGSYADYDEYSEQYRWLKEDLSKVDRKRTPWLLVLFHVPWYNSNKAHQGAGDDMMAAMEPLLYAASVDLVIAGHVHAYERSKRVYNGRLDPCGAVHITIGDGGNREGLAHRYINPQPKWSEFREASFGHGELKIVNSTHAFWSWHRNDDDESVKADDIWITSLVSSGCVDQKTHELRSTLMTP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3441 435 Gene3D - 136 423 IPR029052 -
Ssu6g3441 435 CDD MPP_PAPs 136 414 IPR041792 -
Ssu6g3441 435 Pfam Purple acid Phosphatase, N-terminal domain 45 125 IPR015914 GO:0003993|GO:0046872
Ssu6g3441 435 Gene3D - 44 135 - -
Ssu6g3441 435 Pfam Calcineurin-like phosphoesterase 140 330 IPR004843 GO:0016787
Ssu6g3441 435 PANTHER PURPLE ACID PHOSPHATASE 5 425 - -
Ssu6g3441 435 SUPERFAMILY Metallo-dependent phosphatases 138 403 IPR029052 -
Ssu6g3441 435 PANTHER ACID PHOSPHATASE RELATED 5 425 IPR039331 GO:0003993
Ssu6g3441 435 Pfam Iron/zinc purple acid phosphatase-like protein C 346 404 IPR025733 -
Ssu6g3441 435 SUPERFAMILY Purple acid phosphatase, N-terminal domain 32 134 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3441 Ssu-Chr6 77133764 77136526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3441 41 422 Miscellaneous Gene Families AT2G03450 26.535 1.17e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3441 K22390 - gmx:100787977 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3441 6 77133764 77136526 Ssu6g3441 6 77133764 77136526 ECH