Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3440 ATGGCTTTTGTCGGGACCCGAGTCCAAACCACCACCTGGTTCAAGTTCAACCCTTCACACCGCCACAAGCTCCGTCTACGGAGAGCCCCGAAGATTTCGATGTCGACAATGCAGGGCAAATCTAAAAGACCCATTTGCCCATCTTGTTCCAAACCCACCCGAACGTGTCTCTGCTCTCGAATTCTCACACCGGGTATCGATAATTCGGTGCATGTGACCATTCTACAGCACGCGCAAGAGCGTAAGCACCCGCTCAATTCTACCAGAATCGCTAGATTGGGCCTTAAGAATCTCACCGTTGCAACTGTTTCTGATGTTAACTTCGAAGCCCGGCTCCTGATTCGGTTATTGGATCCGAACTCCCAACCGGGTCATCCTGGAAACGTGCCAAATGGATTGTTTTCTCGTCAGTCTTGGGAAATTGGAGAGACCCAGAAATTGTTTTCTgagaaaaattcaaacttgATTGATACTGATAGTGCTGGAAAATGTGGTTTGAGAAATGATCTTGGATATGTTCTGGATTCCCTTTCTCATGCTGAGGATGTGAAACAAGAGAGTATCAGTGATGGTGCAGTGGTGAGTGATGAAGTTGAGAAAAATGCAATTAGTCCAAATTGTGATTTAACTGGAGGTGTACATGAAGAGAATGGAGGCCTTGCTATTACTGTTGCCATTGGCAAATATGGTGCCGTTAACTCTCTGTCTCATATTTGGATGGCACAAGCACAATGTCAATTCCCCAAGTTAAGCTTTGACAAGATTTTGGCTTATCCTGAAGCTTGTGAAGCACTCTCAAAAGGGTTTTGGGTGAAGAAGTTCCAAATGAAGCAACTGAATAGGGAGGTAGACTTGGAAGAATGCGAAGAATTTGAGCTTGAGGTTCGTCCTGGATCGGTACTACTATTTCCCTCTGATAAGGCTGTTAATATTGGTGACCTAGATGCTATTGGTTTTGAGGTGAAGAACTTGATTGTCCTGGATGGGACATGGGCTAAGGCAAAAAGGATTTATAGTGAAAATCCTTGGTTGAACATTTTGCCCCATGTGAAGTTGGAAGTGAATGAGATTAGCTTGTATAGTGATGTGCGACATCAGCCTAAAGCTGGTTATTTGTCCACCATTGAGAGCATTGTATTTGCCTTGAAGGCAGTTGGGGAGAATCATGAGGGTTTGGATGGTCTCTTGGATACTTTTGAGTCCATGGTTGGAGATCAGAGACGCTGTAAAGAGGAGAGACTGAGCAAACACTTGTCCAGTTGA 1263 0.4426 MAFVGTRVQTTTWFKFNPSHRHKLRLRRAPKISMSTMQGKSKRPICPSCSKPTRTCLCSRILTPGIDNSVHVTILQHAQERKHPLNSTRIARLGLKNLTVATVSDVNFEARLLIRLLDPNSQPGHPGNVPNGLFSRQSWEIGETQKLFSEKNSNLIDTDSAGKCGLRNDLGYVLDSLSHAEDVKQESISDGAVVSDEVEKNAISPNCDLTGGVHEENGGLAITVAIGKYGAVNSLSHIWMAQAQCQFPKLSFDKILAYPEACEALSKGFWVKKFQMKQLNREVDLEECEEFELEVRPGSVLLFPSDKAVNIGDLDAIGFEVKNLIVLDGTWAKAKRIYSENPWLNILPHVKLEVNEISLYSDVRHQPKAGYLSTIESIVFALKAVGENHEGLDGLLDTFESMVGDQRRCKEERLSKHLSS 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3440 420 Coils Coil 276 296 - -
Ssu6g3440 420 PANTHER DTW DOMAIN-CONTAINING PROTEIN 2 17 416 - -
Ssu6g3440 420 SMART DTW_2a 42 411 IPR005636 -
Ssu6g3440 420 Pfam DTW domain 43 407 IPR005636 -
Ssu6g3440 420 PANTHER UNCHARACTERIZED 17 416 IPR039262 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3440 - - gmx:100797499 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3440 6 77130685 77131947 Ssu6g3440 6 77130685 77131947 ECH