Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3437 ATGGCGAAGATAGCGTGGCTCCTGCTCCTGGTGTCAGTGTCCGTAATGGGCCTTCAACTTTGGGCCCTGAAGTCGCCGTTCAAGCCGCGCGACGTGCTTCCTCTGCTGCCGAGACAGGTGTCGTGGCCCATCCTCAACCGCCTCCACAGCGCGGTGGATCTTCTGCCCGTCTTCGTCGGCGCCGCTTCTTCCGCGGACGACAATCTCCAGTGGAAGGGTGCATGCTTCTACCAGAACAAAGCGTGGATGGTGTTTCACAACAAGAGCAGCACTGAATTTGGTGGTGGAACCCTTCACATCAAGGTTAGCGATGCTCACAGTTGGACATGCATGGATCTTTATCTTTTTGCCACCCCTTATCGGGTAACATGGGATTATTATTTCCTGGGCCGGGAGCATACACTTGAGATCAAAGCTTGGGAAGGGAAAGCTGAGTATGAGTATGTGAAAAACCATGGGTTATCAATTTTCCTCTTGCAAGCTGGGATGTTGGGGACCCTTCAAGCACTTTGGGAGGTTCTCCCTCTGTTTACAAATACTGGATGGGGCGAGAACtccaatattaattttttggagAAACATATGGGAGCTTCTTTTGAAGCACGCCCCCAGCCTTGGGTTACAAATGCCAGTGCTGATGACATTCATTCTGGAGATTTCCTTGCCGTTTCAAAAATTCGGGGTCGGTGGGGTGCTTTCGAGACTCTAGAGAAGTGGGTTAGTGGAGCTTATGCTGGTCACTCTGCAGTTTGCCTAAGGGACTCTGATGGGAACCTTTGGGTTGGAGAGTCAGGACATGAAAATGagaagGGAGAAGACATAATTGCTTTGATACCATGGGAAGAGTGGTGGGACTTTGAACTGAATAAAGATGATTCCAATCCCCATATTGCACTGCTTCCGTTGCACCCTGACTTGCGTGCCAGGTTTAATGAGACTGCTGCATGGGAGTATGCACTGGGCATGGCAGGAAAACCATATGGTTACCATAACATGATCTTTAGTTGGATAGACACTTTAAATGACAACTATCCGCCCCCTTTGGATGCCAATGTGGTTGCTTGTGTTATGACAATTTGGAGTCAAATCCAACCTGAGTATGCAGCAAATATGTGGAATGAAGCCTTGAACAAGCGACTTGGAACTGAAGGACTTGACCTTTCAGAAATTTTAGTGGAAGTTGAAAAGCGTGGATCATCTTTTGATGAACTGCTGACAATTCCTGAACAGGATGATTGGGTCTACAGTGATGGAAAGTCAACTTCTTGCATCGCTTTTATACTTGAGATGTACAAGGAGGCAGGGCTGTTTGATCCAATTGCTAGTTCTGTTCAAGTGACAGAGTTTACGATAAAAGATGCTTACATTCTCAACTTTTTTGAGACCAATTCTAGTCGCTTGCCAAAATGGTGCAATGATGGAGACACGGTGAAGCTTCCTTATTGTCAAATTAAAGGCAAGTATCGAATGGAGTTACCTGGATACAACACCATGCAACCTTACCCTCATATGAATGAAAGGTGCCCATCTCTTCCTCCAAAGTACTTCAGACCCAAGAATTGCTAG 1566 0.4636 MAKIAWLLLLVSVSVMGLQLWALKSPFKPRDVLPLLPRQVSWPILNRLHSAVDLLPVFVGAASSADDNLQWKGACFYQNKAWMVFHNKSSTEFGGGTLHIKVSDAHSWTCMDLYLFATPYRVTWDYYFLGREHTLEIKAWEGKAEYEYVKNHGLSIFLLQAGMLGTLQALWEVLPLFTNTGWGENSNINFLEKHMGASFEARPQPWVTNASADDIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHSAVCLRDSDGNLWVGESGHENEKGEDIIALIPWEEWWDFELNKDDSNPHIALLPLHPDLRARFNETAAWEYALGMAGKPYGYHNMIFSWIDTLNDNYPPPLDANVVACVMTIWSQIQPEYAANMWNEALNKRLGTEGLDLSEILVEVEKRGSSFDELLTIPEQDDWVYSDGKSTSCIAFILEMYKEAGLFDPIASSVQVTEFTIKDAYILNFFETNSSRLPKWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYPHMNERCPSLPPKYFRPKNC 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3437 521 Gene3D endopeptidase domain like (from Nostoc punctiforme) 208 452 - -
Ssu6g3437 521 PANTHER PLANT/F10M23-360 PROTEIN 15 521 - -
Ssu6g3437 521 PANTHER OS01G0793500 PROTEIN 15 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3437 Ssu-Chr6 77100956 77107164 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3437 - - gmx:100789468 1025.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3437 6 77100956 77107164 Ssu6g3437 6 77100956 77107164 ECH