Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3431 ATGGTAGAGGTTCTTCTAGGAGCATCACCTCCTCCATCTCACTGTTCTTCTTATCCTCCTATTCCGAGACAATGCAGGACAGTGTCGGGAAGAACATTGGTGAAGAAGTGCTCGTTGGAACTCCCAAGTAAGGTTTTGACCAAGCATGTCTTATCTGGGCTTGCTGCTTCCTTGATATTTATTTCTCCAGCAAATCAGTCTGTTGCAGCAGATCTATCTTGTgcacaaaataatatatgccAACTTGCCAGTGCCAGTGATAATGCAGTTATTTCACCATTTGAAAATGGATCTAATGAAAAAGGTGCAACTCTAATGATGATGAGAGGTATGACAGCCAAGGATTTTGACCCTGTAAGATACTCGGGAAGATGGTTTGAAGTTGCTTCACTTAAACGAGGATTTGCGGGACAAGGCCAAGAAGACTGTCATTGCACTCAGGGCGTATATACATTTGATAGGGAAGTACCATCTATCCAAGTTGATACTTTTTGTGTTCATGGAGGCCCTAATGGATTTATAACTGGAATTAGGGGAAAGGTTCAATGTCTTTCAGAAGAAGATTTGGAGAAAAAAGAGACACAGCTAGAGAAGCAGGAAatgatcaaagaaaaatgctatcTCCGCTTTCCTACATTACCATTCATTCCCAAGGAACCTTATGATGTGATTGCTACTGATTATGACAATTTTTCTCTTGTTTCAGGAGCTAAGGATAGAAGTTTTATTCAGATATACTCAAGGACACCTAACCCAGGACCAGAATTTATAGAGAAGTACAAGTCTTACCTTGAAAACTTTGGATATGATCCAAGCAAAATTAAAGATACACCCCAGGATTGTGAAGTAATGTCCAATAGTCAGCTGGCAGCTATGATGTCCATGTCTGGAATGCAGCAGGCACTAACAAACCAGTTTCCTGATCTAGGACTGAACGCCCCTATTGAGCTTAATCCTTTCACAAGTGTATTTGACACTTTGAAGAAGCTTCTTGAGCTTTATTTTAAGTAG 1011 0.3917 MVEVLLGASPPPSHCSSYPPIPRQCRTVSGRTLVKKCSLELPSKVLTKHVLSGLAASLIFISPANQSVAADLSCAQNNICQLASASDNAVISPFENGSNEKGATLMMMRGMTAKDFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDREVPSIQVDTFCVHGGPNGFITGIRGKVQCLSEEDLEKKETQLEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDRSFIQIYSRTPNPGPEFIEKYKSYLENFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLNAPIELNPFTSVFDTLKKLLELYFK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3431 336 PANTHER CHLOROPLASTIC LIPOCALIN 31 336 - -
Ssu6g3431 336 SUPERFAMILY Lipocalins 112 292 IPR012674 -
Ssu6g3431 336 CDD lipocalin_CHL 108 248 - -
Ssu6g3431 336 Coils Coil 184 204 - -
Ssu6g3431 336 PANTHER LIPOCALIN 31 336 IPR002345 GO:0036094
Ssu6g3431 336 Gene3D - 111 293 IPR012674 -
Ssu6g3431 336 Pfam Lipocalin-like domain 119 279 IPR000566 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3431 - - gmx:100814557 592.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3431 6 76952921 76955423 Ssu6g3431 6 76952921 76955423 ECH