Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3153 ATGGAGAACTTCCCTGTGATCAACTTGGAGAATATCAATGGTGAGGAGAGGAAGGCTATCTTGGAGCAAATTGACGATGCTTGCCAGAACTGGGGGTTTTTTGAGTTGGTGAATCATGGAATACCCTTTGAACTTTTGGATACGGTGGAAAGGTTAACGAAGGAGCATTATAGGAAATGCATGGAGAAGAGGTTCAAGGAGGCAGTGGGAAGCAAAGGGTTGGAGGGTGTCCAGGCTGAAGTAAAGGACATGGACTGGGAGAGCACCTTCTTCTTGCGCCATCTCCCACACTCCAACATCTCCGAAATCCCTGATCTCAGCCAAGAGTACAGTGATGCTGTTATCTACCCTGCACCGGAATTGTTGGAGAGAGACGCAGAGGAGACAGACATAGTATACCCAAAATTTGTCTTTGAGGATTACATGAGGCTCTATGCTACGCTGAAGTTCCAGGCAAAGGAGCCGAGATTCCAAGCCATGAAGGCCgttaacttattttag 501 0.4651 MENFPVINLENINGEERKAILEQIDDACQNWGFFELVNHGIPFELLDTVERLTKEHYRKCMEKRFKEAVGSKGLEGVQAEVKDMDWESTFFLRHLPHSNISEIPDLSQEYSDAVIYPAPELLERDAEETDIVYPKFVFEDYMRLYATLKFQAKEPRFQAMKAVNLF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3153 166 SUPERFAMILY Clavaminate synthase-like 3 113 - -
Ssu6g3153 166 Pfam non-haem dioxygenase in morphine synthesis N-terminal 5 95 IPR026992 -
Ssu6g3153 166 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 112 160 - -
Ssu6g3153 166 SUPERFAMILY Clavaminate synthase-like 111 161 - -
Ssu6g3153 166 Gene3D - 1 114 IPR027443 -
Ssu6g3153 166 PANTHER ACC OXIDASE 2 3 111 - -
Ssu6g3153 166 PANTHER ACC OXIDASE 2 112 160 - -
Ssu6g3153 166 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 3 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3153 Ssu-Chr6 71645424 71646769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3153 11 50 Glycosyltransferase AT5G59530 40.000 8.02e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3153 K05933 - gmx:100792063 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3153 6 71645424 71646769 Ssu6g3153 6 71645424 71646769 ECH
Ssu6g3153 6 71645424 71646769 Ssu9g1667 9 53574384 53574824 PCT