Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3065 ATGATTAGGGATGATGATGCATCATGGATGACACTTACCTTTAATAACCCGTTTTCCATTTATAACCCCCACCCCTTTCGTTTCTTTACCTTTGCCCGCcgccctctcctctctcttcaCTACCATCAAAACCGTTTTCCCTTTCCCTCACCACTTCTCATGTGGCCACCGTGGCTCAATTCACCGAACCGGTTCCGCAACACTCCACCGCCGTCACCGTCACCGTCGCATTCTCGATCTCGCTCGTTCAGCTTCTCTTGCTCCTCCTTCAAAGACATTCAAAGCCTCCTCCAAGACAAACCCGAGCCCGCCGCTCCCAAATCCCCCTCCCTCTTCCGCCGCGTCCGGATCTCCACCGCCGTCCTCCGCGCCTGGGGCGCCTCTCGCGCCTCCGCCCCCGCCGCATTGCCGCCCGGCCTCGACCAGGGCGTCGTCGTCTACTTCACCAGCCTCCGCGTCGTCCGCCGCACCTTCGATGACTGCCGCGCCGTCCGATCCATCCTCCGCGGCCTCCGCGTCGCCGTCGACGAGCGCGACGTCTCCATCGACGACCGCTTCCGCGACGAGCTCCACGTGATCCTCGGCCGCCGCAACCTGGCGCTGCCGCGCGTCTTCGTCGGCGGCGTCTACGTCGGCGGCGCCGACGACGTCCGGCAGCTCCACGAGACCGGCGAGCTGCAGCGCCTCATCGAACGGCTCCCGAGGTCGAATCAGAACACCTGCGATTGCTGCGGAGGGTTCAGATTCGTCGTCTGCGATGAGTGCAACGGAAGCCACAAAGTGTTCACCGAAAAACACGGGTTCAGAAGCTGCTCATCTTGCAACCCCAACGGCCTGATCAGGTGCCCCTCATGCTTCTTCGTGCTCCCGCACCACACCAGATAG 885 0.609 MIRDDDASWMTLTFNNPFSIYNPHPFRFFTFARRPLLSLHYHQNRFPFPSPLLMWPPWLNSPNRFRNTPPPSPSPSHSRSRSFSFSCSSFKDIQSLLQDKPEPAAPKSPSLFRRVRISTAVLRAWGASRASAPAALPPGLDQGVVVYFTSLRVVRRTFDDCRAVRSILRGLRVAVDERDVSIDDRFRDELHVILGRRNLALPRVFVGGVYVGGADDVRQLHETGELQRLIERLPRSNQNTCDCCGGFRFVVCDECNGSHKVFTEKHGFRSCSSCNPNGLIRCPSCFFVLPHHTR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3065 294 CDD GRX_GRX_like 143 282 - -
Ssu6g3065 294 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 56 289 - -
Ssu6g3065 294 Pfam Glutaredoxin 145 211 IPR002109 -
Ssu6g3065 294 ProSiteProfiles Glutaredoxin domain profile. 132 237 - -
Ssu6g3065 294 PANTHER GLUTAREDOXIN (GRX) FAMILY PROTEIN 56 289 - -
Ssu6g3065 294 Gene3D Glutaredoxin 140 232 - -
Ssu6g3065 294 SUPERFAMILY Thioredoxin-like 142 231 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3065 Ssu-Chr6 70113340 70114224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3065 K17479 - gmx:100791927 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1622 9 52884704 52885624 Ssu6g3065 6 70113340 70114224 PCT