Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3030 ATGGGGAGGTTGTTTGTGGTCCATCTGGAGGGGAAGATCTATAGCTGCAAACACTGCCGCACCCATCTTGCTGTTTCTGAAGACATCGTTTCCAAGTCTTTCCACAGCAGACATGGGAAAGCTTATCTCTTCAGTAAGGTtGTGAATGTTTCTGCTGGAGAAAACGAGGACAGACAGATGCTTACTGGGATGCATACTGTGGCTGACATTTTCTGTGTGGGCTGTGGATCAATTGTGGGTTGGAAATATGAGACTGCTCATGAAAAAAGCCAGAAGTACAAGGAAGGAAAATCTGTACTTGAACGGTACAAAGTATCAGGTCCTGATGGCAGCAATTATTGGGTCAGCCATGAAGCACATGTTGGTGGAAGTGATGCAGATGATGCTTAG 390 0.4564 MGRLFVVHLEGKIYSCKHCRTHLAVSEDIVSKSFHSRHGKAYLFSKVVNVSAGENEDRQMLTGMHTVADIFCVGCGSIVGWKYETAHEKSQKYKEGKSVLERYKVSGPDGSNYWVSHEAHVGGSDADDA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3030 129 PANTHER PROTEIN YIPPEE-LIKE 1 129 - -
Ssu6g3030 129 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 13 106 IPR004910 -
Ssu6g3030 129 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 1 129 IPR039058 -
Ssu6g3030 129 ProSiteProfiles Yippee domain profile. 12 109 IPR034751 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3030 Ssu-Chr6 69368067 69370776 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3030 - - cit:102609322 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3030 6 69368067 69370776 Ssu6g3030 6 69368067 69370776 ECH
Ssu9g1581 9 52087774 52089981 Ssu6g3030 6 69368067 69370776 PCT