Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2990 ATGTTGGTTTACGTCTTCTCATTTCTGTTACCATTTTGTGTCTTCTCTGATTCCACCGTCCACGTCGACTGCGCCACCACCATCTACCGTTTGGTTCTTACTCCTCCCTTAGCTGCATCAATGATCATTGGCCTTTTTGAGTTGATGGAGAAAGTCATTGGACGGAACTTCTGGTTTTGTAGTAGCTCGTACATGATTTCATATGATGTTTGTGGCTGTTATCTGCCTCAGTCAATACTTTggaacaatgtttttaaaaccggactgGTCATTGGACTGATCGGTCACCAGACCGGTTCACAGTTTGACCGGTCGAACCGGCTGATCCAATCCAGTTTTCAAAAGGAAATGGGTTTGTGGACCTTACTTGAGGGGTTCCTGCTTCTTGCAAATGCACTAGCAATACTAAATGAGGACCGCTTTCTTGCACCTAGAGGATGGGGCGTAACAGATTTTTCAGCTGGCCAGAAAAAATCTTTCAAAGGCCAGCTTATAGGTCTCATTTATGCAACTCAGTACCTAAGATTTCCTCTTATACTTCTCAACTCTATCTTCATTATCGTGAAGTTAATTTCTGGATGA 582 0.4141 MLVYVFSFLLPFCVFSDSTVHVDCATTIYRLVLTPPLAASMIIGLFELMEKVIGRNFWFCSSSYMISYDVCGCYLPQSILWNNVFKTGLVIGLIGHQTGSQFDRSNRLIQSSFQKEMGLWTLLEGFLLLANALAILNEDRFLAPRGWGVTDFSAGQKKSFKGQLIGLIYATQYLRFPLILLNSIFIIVKLISG 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2990 193 Pfam Yos1-like 119 193 IPR013880 -
Ssu6g2990 193 PANTHER YOS1-LIKE PROTEIN 117 193 - -
Ssu6g2990 193 PANTHER UNCHARACTERIZED 117 193 IPR013880 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2990 Ssu-Chr6 68717735 68720283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2990 K22939 - gmx:100305560 133.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1552 9 51633358 51633591 Ssu6g2990 6 68717735 68720283 PCT