Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2986 ATGAAGAAGCTCTGTCCCAATCTTACTCGCGAGGATGGGCTCGAAACGGTGCTGGAGGTTCCCATCCCAGAGGAGATTTTCTCCATCAAGAGCGGAACCAGCAGAGCATGGCAGAACATGAAGTCATGGATGAAACCAAACGTTGAATCTTCAAGATCATCATCACTCTTTGGAGGCCGAAACACGGACATCCAACTATTGCTCGGTGTTGTTGGAGCGCCATTGATCCCTCTCCCTATCACCTCTCACAACCAACCCATCACCATTAAATCCCATAACATTGAGGCTTCAATGGCGAAATACATAGTGAAACAGTACGTGGCGGCTGTGGGAGGGGAGAGTGCTTTGAATTCGGTGGAAAGCATGTATGCGATGGGGGAGGTGAGAGTAGGGACCTCAGAGTTTTCAGCAGGGGAAGAATGTGTGAGTAGCAAGAAGAGGGTGAAGGTGAAGAAGGTGCAGAGGAAAGGGGAAGTGGGAGGGTTTGTTGTGTGGCAGAAGAAGCCAGAACTGTGGTGCTTGGAGCTGGTTGTTTCTGGGTACAAAATCAGTGCCGGGAGTGATGGGAAAGTGGCGTGGAGGCAAACACCTTGGCACCATTCTCATGCTTCTCGTGGCCCACCAAGACCACTTAGGCGTTTACTTCAGGGTCTTGATCCAAGGTCCACGGCCAATCTATTCAACAACTCCATATGCATTGGGGAGAAGACAGTGAATAACGAAGAATGTTTCATATTGAGACTTGAAGCCGATTCCACTTCACTTCGAACAAGAAGCAGCAGCAACGTAGAGATTATTCGCCACACGGTGTGGGGCTACTTCAGCCAAAGAACAGGCCTTTTGGTCCAATTAGAAGACTCCCACTTGCTCAAACTCAAGTCCACTACAAGTGACGCCATATTCTGGGAAACCAACATGGAGTCCCTGGTACAAGACTACAGAGCCGTGGATGGCATTAACATAGCACACGCGGGGAAGACTTGGGTCACATTGTCAAGGTTCGGTGAGGGCCCTGAGAGCCATTCCAGGACCAGAATAAAAGAGGTTTGGCAAATTGAAGAGGTGGATTTTAACATCAACGGGTTGTCCTTGGATTGCTTCCTACCCCCTAGTGATTTgaagagagaggaagaaaaagggCTAGAAGAGTGTGGGGTGGCTGCAAGCAATGCAAAGTTGCCCTATAAGATTCAATCTGCTTCTTTTAAGATTAGTGTTTCCAAAGTAGCTGCCGTTAACGTGGATGATTCAAGTGCCAGTGAAAGTGAAAGTGAAAGGGATGATGAAGACGTCTAA 1296 0.4769 MKKLCPNLTREDGLETVLEVPIPEEIFSIKSGTSRAWQNMKSWMKPNVESSRSSSLFGGRNTDIQLLLGVVGAPLIPLPITSHNQPITIKSHNIEASMAKYIVKQYVAAVGGESALNSVESMYAMGEVRVGTSEFSAGEECVSSKKRVKVKKVQRKGEVGGFVVWQKKPELWCLELVVSGYKISAGSDGKVAWRQTPWHHSHASRGPPRPLRRLLQGLDPRSTANLFNNSICIGEKTVNNEECFILRLEADSTSLRTRSSSNVEIIRHTVWGYFSQRTGLLVQLEDSHLLKLKSTTSDAIFWETNMESLVQDYRAVDGINIAHAGKTWVTLSRFGEGPESHSRTRIKEVWQIEEVDFNINGLSLDCFLPPSDLKREEEKGLEECGVAASNAKLPYKIQSASFKISVSKVAAVNVDDSSASESESERDDEDV 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2986 431 PANTHER LIPASE 1 420 IPR006873 -
Ssu6g2986 431 Pfam Protein of unknown function (DUF620) 122 370 IPR006873 -
Ssu6g2986 431 PANTHER LIPASE 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2986 Ssu-Chr6 68631483 68634354 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2986 - - gmx:100815870 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1545 9 51524916 51528127 Ssu6g2986 6 68631483 68634354 PCT