Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2907 ATGGGGAACACCATGGGAAGGAGTAACAAGGCCAAGGTGATGAAGGTAGATGGAGAGACGTTCAAGCTGAAGACCCCAGCCAGAGCAAACGACGTCGTCAAGGACTACCCCGGTCACGTTCTGCTGGACTCCGAAGCGGTGAAACATTTCGGGCTTCGGGCCAGGCCCCTCGAGCCTTATCAGGAGCTGAAGCCCAAAAAAATCTACTTCCTCGTGGAGCTACCGAATATTCAGCCCGAAGAGATAAAAACGGCGCTACCGAGGAGGGTGCGATCCAGTGGTATACGCGGCATGAACGCCAAGGATAGGCTCGAGCTCTTGATGCTCTCGAAACGCTCCGTTTCGGACCTCCCCCTCGTGAGGCAGGCCCCGAATCAGGGCATGGAGGGGCCCATGAGGGTTAAGATGAGGCTCCCCAAGGCCCAATTGGAAAAGCTGATGGAGGAAAGCACCGACGGGTCCGAGGTGGCGGAGAAAATCATAAGTTTATACATTGGAACCAATGCCGGCGAGGCTGGCGGCGTTGCGGCGGCGGAGGACGGTGGCGTCAAAACGCTGCACCATCACACTCACAAACCACGTGGGAAACGAGTGAGTTTTAACCCAATGGAAGATGAAGAAATTCGTGTGGAAGCAGCTGCTCAATAG 648 0.5571 MGNTMGRSNKAKVMKVDGETFKLKTPARANDVVKDYPGHVLLDSEAVKHFGLRARPLEPYQELKPKKIYFLVELPNIQPEEIKTALPRRVRSSGIRGMNAKDRLELLMLSKRSVSDLPLVRQAPNQGMEGPMRVKMRLPKAQLEKLMEESTDGSEVAEKIISLYIGTNAGEAGGVAAAEDGGVKTLHHHTHKPRGKRVSFNPMEDEEIRVEAAAQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2907 215 Pfam PADRE domain 1 175 IPR025322 -
Ssu6g2907 215 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN 1 213 - -
Ssu6g2907 215 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2907 Ssu-Chr6 67187071 67189381 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2907 - - gmx:100783912 353.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1469 9 49979807 49982846 Ssu6g2907 6 67187071 67189381 PCT