Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2864 atggccaAAACCAAAAGGAGCATCTCACTCTCAAACTCACTCTTCATTATTACGATGTGTCTTTTTCACGTGACCTTGTTCCCTCGGTTTTCGGAGTGTTCGAGCACGAGCACGTTCCTGTACAGCGGGTGCACGCAGCAGCGGTACACCCCGAACTCGCCGTACGAGTGGAACCTCGACTCGCTCCTCACCTCGCTGGTGAACTCGGCGACGTACTCGTCCTACAACAACTTCACCGTGCTGGGGTCCACGCAGCAGGACGCGGTGTCCGGCCTCTACCAGTGCCGCGGCGACCTCGCCATGCCGGACTGCGCCGCCTGCGTCGCGCGCGCCGTCACGCGCGCCGGCGACATCTGCCGCGGGACCTGCGGCGGCGCGGTGCAGCTCGACGGCTGCTTCGTGAAGTACGACAACGCCACGTTCCTCGGCGCGGAGGACAAGGCGGTGGTGTTCAAGAAGTGCGGGCCCTCCGTCGGGTACAACCCCGACGCCATGGGGAGCCGCGACGCCGTCCTCGCCGGACTCGCCGCCGCCGGGGGGAACTTCCGGGTGGGAGGCTCCGGCGGCGTGAGAGGGGTGGCGCAGTGCACCGGCGACCTCAGCCCCGGGGAGTGCCAGGACTGCGTGGCGGAGGCGATCTCGCGGCTGAAGAGCGATTGCGGGACGGCGGATTACGGGGACATGTTTCTCGGGAAGTGTTACGCGAGGTACTCCACCGGTGGGGCCCATGACGAGTCCAAGGCCCACGGCAAATCGAGTCATGGAGGTGAAAAGACATTTGCGATCATTATTGGATCATTAGCGGGAGTGGCTgtacttattattttacttgctTTCTTGAGCAAGATTTGTGGGCGACAGGgtaaataa 870 0.6149 MAKTKRSISLSNSLFIITMCLFHVTLFPRFSECSSTSTFLYSGCTQQRYTPNSPYEWNLDSLLTSLVNSATYSSYNNFTVLGSTQQDAVSGLYQCRGDLAMPDCAACVARAVTRAGDICRGTCGGAVQLDGCFVKYDNATFLGAEDKAVVFKKCGPSVGYNPDAMGSRDAVLAGLAAAGGNFRVGGSGGVRGVAQCTGDLSPGECQDCVAEAISRLKSDCGTADYGDMFLGKCYARYSTGGAHDESKAHGKSSHGGEKTFAIIIGSLAGVAVLIILLAFLSKICGRQGK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2864 289 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 286 - -
Ssu6g2864 289 Pfam Salt stress response/antifungal 187 239 IPR002902 -
Ssu6g2864 289 Pfam Salt stress response/antifungal 44 138 IPR002902 -
Ssu6g2864 289 Gene3D - 166 240 IPR038408 -
Ssu6g2864 289 Gene3D - 35 141 IPR038408 -
Ssu6g2864 289 ProSiteProfiles Gnk2-homologous domain profile. 142 242 IPR002902 -
Ssu6g2864 289 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 11 286 - -
Ssu6g2864 289 ProSiteProfiles Gnk2-homologous domain profile. 37 141 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2864 Ssu-Chr6 66432554 66434501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2864 13 287 Receptor kinase-like Gene Family AT4G05200 24.762 2.30e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2864 - - gmx:100817574 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1444 9 49514141 49516911 Ssu6g2864 6 66432554 66434501 PCT