Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2837 ATGTCGACACCAGAGTCTCGATTTCAGCCAGATACATCTGAGGGATACCCAGAAGATGTCATCGCACGCTGCGGCATGTGGAGCAAGAAACAAAAGTTAACAACCTACTCTAAAGATCAAAAGGTAGATCAATTTCCAACATGTTCCACAACAGTCCAATCCCTTCAAGCAGAGTCTCGGTTTCAGTCTGATACATCTAATGGGTACCTCACACTCGCAGGGTGGGGCATTCTGTGCAAGGAACAAAAGTTACCACCCTGCTCTAAAGATCAAaagGTAGATCAAATTCCCAGATTTTCCACAACAGCCCAACCCCTTCATGACTCTGGCTTTACACACCAAAAAAGGCTCATCACTACAAACCTATCATCATCACCACAAGGTGACACACATGAAGCTGCAATCAAACATGATCCTGCTCGGAGTAGCTGTGCATCTGGTCAACGGAAGAAAATCGCTTACCCGTTTAAGTTGGTGAAGTCTGGAGGAGCTGATGGGGAAACAACCCTCAAAGATATCAATCACCAGATTCTCACCACCCCATCAACATCAATGCCAATTCCTCATTCTGTGACTCATCCATGCAAATTAGCCCGAGGAAGTCTTGGTTTGTCAGAAAAAGAAGTGGCATCCCTTACTAGGATTATCACCCGGGGTAGAGAAAGAGAAGGCTTTCCCGCTATGTCACACTCACACCTCAATAGCTTGTCTTCTGACTGCTCCAGCTCCATGGAATTGGAGATCGGAGCCACTCATACAGATCAGACATTTGAGCCTTGGTTTCAGTCTGATACATCTACTGGGTACCTTCAAGATGCCATTGCAGGCAGGGGCATTTGGTGCACGGAACAAAATTTACCATCCTGCTCTAAGGATCAAAAgGTAGATCAATTTCCAATATTTTCCACAACAGCCCAACCCCTTCACGATTGTGGctttacacacaaaaaaaggcaCATCACTACAAACCTATCATTATCACCACAAGGTGACACACATGAAGCTGCAATCAAACATGATCCTGGTCGGAGTAGCAATGCATCTGAAGGTCGACGGAAGAAAATCGCTTACCCGTTTAAGTTGGTGAAGTCTGGAGGAGTTGAAGGAGAAGCAACCCTCAAAGATATCAATCACCAGATTCTCACCACCCCATCAGCATCCAAGCCAATTCCTCACCCTGTGAAAGATTTTGTGACTCATCCATGCAAATTAGTCCGAGGAAGACTTGGTTTGTCAGGAAAAGAAGTGGCATCCCTTACTCGGATTCACACCCGGGGTAGAGGTTCCATTACCATTATCAGGACCAAGGATTAA 1314 0.449 MSTPESRFQPDTSEGYPEDVIARCGMWSKKQKLTTYSKDQKVDQFPTCSTTVQSLQAESRFQSDTSNGYLTLAGWGILCKEQKLPPCSKDQKVDQIPRFSTTAQPLHDSGFTHQKRLITTNLSSSPQGDTHEAAIKHDPARSSCASGQRKKIAYPFKLVKSGGADGETTLKDINHQILTTPSTSMPIPHSVTHPCKLARGSLGLSEKEVASLTRIITRGREREGFPAMSHSHLNSLSSDCSSSMELEIGATHTDQTFEPWFQSDTSTGYLQDAIAGRGIWCTEQNLPSCSKDQKVDQFPIFSTTAQPLHDCGFTHKKRHITTNLSLSPQGDTHEAAIKHDPGRSSNASEGRRKKIAYPFKLVKSGGVEGEATLKDINHQILTTPSASKPIPHPVKDFVTHPCKLVRGRLGLSGKEVASLTRIHTRGRGSITIIRTKD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2837 437 MobiDBLite consensus disorder prediction 121 144 - -
Ssu6g2837 437 PANTHER PROTEIN XRI1 226 437 IPR039933 GO:0007140|GO:0007143
Ssu6g2837 437 PANTHER - 226 437 - -
Ssu6g2837 437 MobiDBLite consensus disorder prediction 324 351 - -
Ssu6g2837 437 PANTHER PROTEIN XRI1 5 57 IPR039933 GO:0007140|GO:0007143
Ssu6g2837 437 PANTHER - 5 57 - -
Ssu6g2837 437 PANTHER PROTEIN XRI1 57 220 IPR039933 GO:0007140|GO:0007143
Ssu6g2837 437 PANTHER - 57 220 - -
Ssu6g2837 437 MobiDBLite consensus disorder prediction 333 351 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2837 Ssu-Chr6 65757605 65763891 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2837 - - gmx:100811166 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1413 9 49064336 49066260 Ssu6g2837 6 65757605 65763891 PCT