Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2836 ATGGCAAAGACACGCACTGTTGGAGTAGCCGTGGACTTCTCTCCCACCAGCAAATTAGCTCTTCGATGGGCCGTTGATAATCTCATCAACAAAGGTGATCAAATCATCTTGATCAACGTTCAACCTCCCCAAGCTCATCACACCCGAAAGGAGCTTTTTGAGGACACTGGTTCACCTTTGGTGCCTCTGGAGGAATTGAGGGAGTTGAACTTTACTAAGCAATATGGGATTGCTAGGGATCCTGAAGTCATAGATATCCTTGACACTGCCTCCAAGACTAAAGGGGCAAAGGCGGTGGCAAAGGTGTACTGGGGAGATCCAAGGGAGAAGTTGTGCAATGCTGTGGAAGATCTTCACCTGGACTCTTTGGTTGTTGGAAGCAGGGGTTTAGGTCCCATTCAAAGGGTGTTGCTGGGCAGTGTAAGCAAGCATGTGATGACAAATGCATCTTGCCCCGTCACAGTGGTTAAGGGAAAGCAATCTTCCAATTCCCGTCATTAA 501 0.481 MAKTRTVGVAVDFSPTSKLALRWAVDNLINKGDQIILINVQPPQAHHTRKELFEDTGSPLVPLEELRELNFTKQYGIARDPEVIDILDTASKTKGAKAVAKVYWGDPREKLCNAVEDLHLDSLVVGSRGLGPIQRVLLGSVSKHVMTNASCPVTVVKGKQSSNSRH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2836 166 PRINTS Universal stress protein signature 4 22 IPR006015 -
Ssu6g2836 166 PRINTS Universal stress protein signature 135 157 IPR006015 -
Ssu6g2836 166 PRINTS Universal stress protein signature 117 129 IPR006015 -
Ssu6g2836 166 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 4 158 - -
Ssu6g2836 166 CDD USP_Like 6 156 - -
Ssu6g2836 166 PANTHER IMP2'P 1 160 - -
Ssu6g2836 166 Pfam Universal stress protein family 5 157 IPR006016 -
Ssu6g2836 166 Gene3D HUPs 2 166 IPR014729 -
Ssu6g2836 166 PANTHER OS02G0773200 PROTEIN 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2836 Ssu-Chr6 65751123 65752117 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2836 - - gmx:100500682 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2836 6 65751123 65752117 Ssu6g2836 6 65751123 65752117 ECH