Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2831 ATGTTCACCAATGACCAGAGGCAACAAGAACGAACGGGAAGATATGGAACTCCCAGATTGCAATTCCTTCAGGAATTGGTGACTCAGTTTCAGAGCACATCGGAGGATGAAACAAGAGAGAAGATTTTGGCAAATTTGGCCAACTTTGCCTATGATCCTTACAATTATAACTTCTTGCGCCAGCTTAACGTTTTGGAACTTTTCATTGACTGCTTAACTGAACCCAATGAAAAGCTTGTAGAATTTGGTATAGGAGGGATCTGCAATTCTTGTGTTGATCCGGCCAATGCTGCAATTGTAACTAAGTTTGATGGGATACCTCTTATAATTCAATGTTTATCAAGCCCAGTTAGGAACACTGTAAATTATGCACTCGGAGGACTTTATTATATCTGTAACAAATCGAACAAGGAAGAGATTTTAAAGCCCGAAGTTATTGATATCATCAAGAGGTATGCAGCAGCTGAAGAAGTTAGTGTGAGCTTCAGTAATCTGGCTAAAGCTTTTCTGAATAAACATCTATCAGGGAACTAG 534 0.3933 MFTNDQRQQERTGRYGTPRLQFLQELVTQFQSTSEDETREKILANLANFAYDPYNYNFLRQLNVLELFIDCLTEPNEKLVEFGIGGICNSCVDPANAAIVTKFDGIPLIIQCLSSPVRNTVNYALGGLYYICNKSNKEEILKPEVIDIIKRYAAAEEVSVSFSNLAKAFLNKHLSGN 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2831 177 Gene3D - 16 169 IPR011989 -
Ssu6g2831 177 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 7 1 175 IPR042462 -
Ssu6g2831 177 SUPERFAMILY ARM repeat 21 153 IPR016024 -
Ssu6g2831 177 SMART arm_5 52 92 IPR000225 GO:0005515
Ssu6g2831 177 SMART arm_5 93 133 IPR000225 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2831 K24825 - gmx:100790639 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2831 6 65624607 65626031 Ssu6g2831 6 65624607 65626031 ECH