Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2823 ATGCCTTCTGCACCAGCCTTAAAGCGCACAGATTCTGTAGTAGATAATATGCCCGATGCATTGAGGCAGAGTCGGTACCATATGAAGAGGTGCTTTGCAAAGTACCTTGGAAAGGGGAGAAGGATCATTAAACTTCATCATTTGATGCAAGAAATGGACCAAGTTATTGATGACAAAAGCGAAAGAAATCAAGTTTTGGAGGGGCTTCTTGGCTTTATATTGAGCTCTACACAGGAAGCTGTTGTTGATCCACCATATGTTGCTTTTGCAATAAGGCCTAATCCAGGAGTTTGGGAATTTGTAAGAGTGAGCTCTGAAGACCTCTCTGTTGAGGGTATCACCCCCACTAACTACCTCAAATTCAAGGAAAGGGTACACGACGAAAAATGGGCAACCGATGAGAACTCATTTGAAGCAGACTTTGGAGCATTCGATTTCCAAATTCCTCAACTAACCCTCTCTTCTTCAATTGGAAATGGACTACAATTTGTTTCCAAGTTCTTAACTTCAAAGTTAACTGGGAAACTGGAGAAAACACAGGCTATAGTGGACTACTTGTTAACACTAAATCATGAGGGAGAAAGCCTGATGATAAATGAGAGCCTGAACTCTGCTGCAAAGCTCCGGATGGCACTGGTAGTGGCTGATGCATTCCTCTCAGGACTTCCCAAAGACACTGCATATCAGAATTTTGAGCTAAGGTTTAAGGAGTGGGGGTTTGAGAGAGGATGGGGAGATACTGCAGGAAGAGTGAAGGAGATAATGAGAACTCTATCAGAAGTACTCCAAGCACCAGACCCATTGAACCTGGAGAAATTTTTAAGCAGGTTACCAATAATATTCAATGTAGTCATCTTCTCTGTTCATGGTTATTTTGGGCAAGCAGATGTCCTTGGCTTGCCAGACACAGGTGGCCAGGTAGTTTACATATTGGACCAAGTCAAGTCTCTGGAAGCAGAGTTGCTTTTGAGAATCCAGCACCAAGGGCTAAATGTGAAACCTCAAATTCTCGTGGTAACAAGGCTCATACCTGATGCTCGGGGAACCAAGTGCCACCAGGAGTTGGAACCAATCAATGATACCAAGCACTCCCACATTTTACGTGTGCCTTTTCAGACAGATAAAGGAATCTTGCGCCAATGGGTTTCTCGCTTTGACGTTTACCCCTATCTTGAGAGGTTTGCTCAGGATGCAACAGCCAAGATTCTGGAGGTCATGGAAGGGAAACCAGATCTTGTTATTGGAAATTACACTGATGGAAATTTGGTAGCATCACTAATGGCTAGAAAACTTGGGATAACTCAGGGAACTATAGCACATGCTTTAGAGAAGACCAAGTACGAAGACTCAGATGTCAAGTGGAAAGAGTTGGACCCCAAGTATCACTTTTCATGTCAATTCATGGCCGATACAGTGGCAATGAATGCAGCTGATTTCATCATAGCCAGCACATACCAGGAAATTGCCGGAAGCAAAGATAGACCTGGACAATATGAAAGCCATGCTGCATTTACCCTCCCAGGGCTGTGTAGGGTTGTTTCAGGGATAAATGTGTTTGATCCTAAGTTCAACATAGCTGCGCCAGGAGCTGACCAGTCTATCTATTTCCCTTAcacagagaaagaaaaaaggctCTCTCAATTTCACCCTGCCATTGAAGACCTTCTCTTTAGTAAAGTGGATAACATTGAGCATATTGGATATCTAGCAGACAGGAGGAAGCCAATCATCTTCTCAATGGCAAGGCTTGATGTTGTGAAGAACATAGCCGGCTTAGTTGAATGGTATGGCAAGAACAAGAGACTCAGAAATTTGGTGAACCTTGTCATAGTAGGGGGCTTCTTTGACCCTTCAAAATCGAAGGATAGGGAGGAAATGgcagaaataaaaaagatgcaTGACTTAATTGATAAGTACCAACTCAAGGGTCAATTTAGATGGATTGCTGCACAGACTAATAGATATCGCAACGGAGAGCTCTACCGTTGCATTGCTGACACAAGGGGAGCCTTTGTGCAGCCTGCTTTGTATGAAGCATTTGGATTAACTGTCATTGAAGCAATGAACTGTGGCTTGCCCACTTTTGCTACCAACCAAGGAGGTCCAGCGGAAATTATTATTGATGGGGTCTCTGGCTTCCACATTGACCCCCTCAATGGAGATGAATCAAGCAACAAAATTGCtgatttctttgaaaaatgCAAAGCGAATCCATCACATTGGAACGTGATTTCTGCAGCTGGATTGCAGCGCATAAATGAATGCTATACCTGGAAGATTTATGCAAACAAGTTGGTAAATATGGGGAGCATTTACACCTTTTGGAGGCAAGTGAATAAGGAGCAAAAAGAGGCAAAGCAGAGATACATTCAGTTGTTCTACAATCTTATATTCAAGAATTTGGTTAAGACTGTGCCTGTTCCAAGTGTTGAACCTCAAGAACCACTGAGCAAGCAGCCAAGTGCCAAATCGCACAGCGCGAGCTGCATCAGACGTTCACAATCCAGATTGCAAAGGTTATTTGGAAATTAA 2532 0.4246 MPSAPALKRTDSVVDNMPDALRQSRYHMKRCFAKYLGKGRRIIKLHHLMQEMDQVIDDKSERNQVLEGLLGFILSSTQEAVVDPPYVAFAIRPNPGVWEFVRVSSEDLSVEGITPTNYLKFKERVHDEKWATDENSFEADFGAFDFQIPQLTLSSSIGNGLQFVSKFLTSKLTGKLEKTQAIVDYLLTLNHEGESLMINESLNSAAKLRMALVVADAFLSGLPKDTAYQNFELRFKEWGFERGWGDTAGRVKEIMRTLSEVLQAPDPLNLEKFLSRLPIIFNVVIFSVHGYFGQADVLGLPDTGGQVVYILDQVKSLEAELLLRIQHQGLNVKPQILVVTRLIPDARGTKCHQELEPINDTKHSHILRVPFQTDKGILRQWVSRFDVYPYLERFAQDATAKILEVMEGKPDLVIGNYTDGNLVASLMARKLGITQGTIAHALEKTKYEDSDVKWKELDPKYHFSCQFMADTVAMNAADFIIASTYQEIAGSKDRPGQYESHAAFTLPGLCRVVSGINVFDPKFNIAAPGADQSIYFPYTEKEKRLSQFHPAIEDLLFSKVDNIEHIGYLADRRKPIIFSMARLDVVKNIAGLVEWYGKNKRLRNLVNLVIVGGFFDPSKSKDREEMAEIKKMHDLIDKYQLKGQFRWIAAQTNRYRNGELYRCIADTRGAFVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEIIIDGVSGFHIDPLNGDESSNKIADFFEKCKANPSHWNVISAAGLQRINECYTWKIYANKLVNMGSIYTFWRQVNKEQKEAKQRYIQLFYNLIFKNLVKTVPVPSVEPQEPLSKQPSAKSHSASCIRRSQSRLQRLFGN 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2823 843 MobiDBLite consensus disorder prediction 810 831 - -
Ssu6g2823 843 Gene3D - 150 279 - -
Ssu6g2823 843 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 300 767 - -
Ssu6g2823 843 MobiDBLite consensus disorder prediction 814 831 - -
Ssu6g2823 843 Gene3D Glycogen Phosphorylase B; 531 758 - -
Ssu6g2823 843 TIGRFAM sucr_synth: sucrose synthase 26 806 IPR012820 GO:0005985|GO:0016157
Ssu6g2823 843 Gene3D Glycogen Phosphorylase B; 284 801 - -
Ssu6g2823 843 PANTHER - 3 823 IPR012820 GO:0005985|GO:0016157
Ssu6g2823 843 Gene3D - 11 149 - -
Ssu6g2823 843 Pfam Sucrose synthase 9 557 IPR000368 GO:0005985|GO:0016157
Ssu6g2823 843 PANTHER SUCROSE SYNTHASE 3 823 - -
Ssu6g2823 843 Pfam Glycosyl transferases group 1 569 733 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2823 Ssu-Chr6 65487033 65491911 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2823 5 806 Glycosyltransferase AT4G02280 57.606 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2823 K00695 - gmx:100808482 1602.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2823 6 65487033 65491911 Ssu6g2823 6 65487033 65491911 ECH