Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2809 ATGGGAGTGCTTTCCAACATGATCGATCGGGAACAACTGAAGCCCGGTGATCACATTTACTCTTGGAGGCAAGCATACATCTATGCACATCACGGAATATATGTCGGTGATGGAATGGTGATCCACTTTACCAGAGGAGCAGGTCAAGAAATTGGAACAGGAACTGTGTTGGACAATCTCCTTTTCAGTTCATCTCCCTCTCATTCTTCTGACACTCCATGCCCAAGATGTGGTGACCAAAGTAGGACTGATGGTGTCATCTCTTCCTGTTTGGATTGTTTCCTTTCTGGTGGTAATCTATACCTCTTTGAGTATGGTGTCTCACCTGCATTTTTTCTGGCCAAAGCTCGAGGAGGTACATGCACCCTTGCTCCTTCTGATCCGACTGAAGATGTCCTTCACCGTGCTTCATTTCTTCTTGAAAATGGATTTGGTGGCTACAATGTTTTCAAGAATAACTGTGAAGACTTTGCAATTTACTGCAAAACAGGTCTGCTTGTATTCACAAGCATCAGTGTTGGCCGCAGTGGGCAAGCGGCATCTTACTTAGCTGCTGCTAGTACAGTAGTTTCTACGCCACTTCGTTTTATGACCACCAGTTTTAGTGGTCTGGCATTGGTGGGTTTTGGCATGTACTGTGTTAGCCGATTGGTTTCTGATATTGGATTACGCCGTGATGTGTCTAAAGTTTCAGTGGAAAGGCTTACAGCTTCACCTGCCTCAGATGTACCAGAGAAGACGCCTGAGATGGCCAAGGAAGATTAG 765 0.4549 MGVLSNMIDREQLKPGDHIYSWRQAYIYAHHGIYVGDGMVIHFTRGAGQEIGTGTVLDNLLFSSSPSHSSDTPCPRCGDQSRTDGVISSCLDCFLSGGNLYLFEYGVSPAFFLAKARGGTCTLAPSDPTEDVLHRASFLLENGFGGYNVFKNNCEDFAIYCKTGLLVFTSISVGRSGQAASYLAAASTVVSTPLRFMTTSFSGLALVGFGMYCVSRLVSDIGLRRDVSKVSVERLTASPASDVPEKTPEMAKED 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2809 254 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 170 - -
Ssu6g2809 254 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
Ssu6g2809 254 PANTHER OS05G0310600 PROTEIN 1 240 - -
Ssu6g2809 254 PANTHER OS05G0310600 PROTEIN 1 240 - -
Ssu6g2809 254 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2809 Ssu-Chr6 65210914 65255782 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2809 - - gmx:100784269 469.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2809 6 65210914 65255782 Ssu6g2809 6 65210914 65255782 ECH