Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2804 ATGGGTACATGTTTTAGCAAGAAGAATGGGGCCTCTACCTCACCCAACAAGTCAGTTTCTCAGCATAGGAATTCTGAGAACAATGTCACTGTCACCTTGTCCAAACCCCCTGAGCCAGACGTGAGCCTGAAGAAGAAACAAGAGCCAGAATCAGCACCACAATATGAAGGTGAAGTGAAGAAAGAGATATTCATCATCAAACACAGGAAGAGCCATGATGATAGggaaagaacaacaacaacaacaacagcctCCAAAACCCCATCTTGCATTGCTCAGCCACCACCAGCACAACAAGCTGATGGGGTTTTCACCAATGAAGAGCCAACAGGTAACAAGGTTGTACCATCCACACCAAACACTGGTGTGGGAGTGAGGACTTCAAGCTGCACCAAAGAAGAGGTTGATGCAATTCTGATCCAGTGTGGGAGGCTCAGCAGAAGCTCTTCTGGCAGAAAGTACTCAGGCTCCAAGAGAAGTTTTGATTTTGACCACTGTGACAATGACACGACTTCTGCTGAGGATGACCAAAGGAAAGCCAAAGGCAATGGCAGGGAGGAAAACGATGGGGTGGCGGCTTCGGAAAGCTGCCACCACCGCCAGTCCCCGAGAAGGTCTCAGGGAAGGAGAAGAACCCCAAGTAGGGAAAGAGAGCAATCCAGTGGCAGAGAAAGGAGAGTGAGTAGATCTCCTGGTAGAAGGTCATCTGACAGCACTGCAAATGCAAGCAACAACAATGCAAGTTCTAGGCCGGGGAAAATGGTGTCTGTTCCTGCCACTGTTTCATCATTGGTTATGGATAAGAGTAACAATTGTGGTGGAGAATCTGGCACCAAGAGGACCACTGTTAAGAGAAATGTTGGTGATGTTGGTTCAAGGAGTGCAGCATCACCACGTGCTCAGTCTCCTGCAAGAGTTAATGGAAATGTGGCAAGTGCTAAAGTGTTGGGTGAGAATCAGCAGCACCAACAACCTTCTCTTAGCCGTAATAACTCTTCAAGGAAAGCAGAACAATCTCCTTACAGAAGAAACCCTCTGAGTGAGGTTGATACTAACAGCAAGGTGCAACAAAACAAACCCAAGATTGAAGCAGAAGCCATTCAGAAACCAAATGGCAGAGTTGCATTAGAGAAGAAGGGGGTGGGTGTGAATTGCAAGACAAAGGAGCAACATGAGGAAGAGTCTTCAGTGCCTGATAGTGCTGTTGTGAAGACAACAGTGGTGTCATCAGGGGTTGACAACCTTAAACCCCAAGGTTTAACAAGAAGCAGATCTTCTAGAAGGTCTAGAGACTTAGACATCAATCCTGAAGCTGTGGTGAATCCTACACATTCCTATGCCTCCCTACTACTTGAAGACATCCAGAACTTCCATCAAAAGaacacaccaccaccaccaccaccacaacaacaacaaccttctatttctctcccaGCATGTCTCACCAAGGCTTGCTCTATCCTTGAAGCCGTTGCTGATCTCAACTCCACCACCAGCTCAAATTTCTCTGGTGCCTGCTCTGAGGACAGGAGGAGTCCATCTACTCAGCAATCCATTAGGAGTGAGTACAATGCTCAATTGGGTTCCAATCACTATGGGAAGAGAATGCCACAGCCAGGTGCCAAGGACCCTTTTGTAGAATCTGAGGTGGCTGTTAGTGATGATGTGATGGAACCAAGCTTGCACAAGTATGTGACAGTGAAGAGGGGTGGTGGGGTTGACATGGAAGACCAAGAGTCTTCAGGAAGCAACAGCTTCACTGTGACTAGCAGTGGCCAACATCACTGGGGCACGTCTTGTTCTTCATGGGAACCCAATTCTGCTGACTCAACAGATTGCTGTACTTCAAGGTTGAGCTCCAGAGAGGAGGGTCAGAAAAGCACCTTAGCCTTGGAAAATAGTTTGTCATCTGAAGCCAAGAAGTGTTTGAACAGCAAAAGGAGAGAGTGTGATCATGAGCACAGCAGTGGCATTGGGCGAGGCAGGCTTGGTTCCAATAAAGGTCTTAACACTTTACCTGTTGTCACAGCTGCTGCAACAACTTAg 2046 0.4555 MGTCFSKKNGASTSPNKSVSQHRNSENNVTVTLSKPPEPDVSLKKKQEPESAPQYEGEVKKEIFIIKHRKSHDDRERTTTTTTASKTPSCIAQPPPAQQADGVFTNEEPTGNKVVPSTPNTGVGVRTSSCTKEEVDAILIQCGRLSRSSSGRKYSGSKRSFDFDHCDNDTTSAEDDQRKAKGNGREENDGVAASESCHHRQSPRRSQGRRRTPSREREQSSGRERRVSRSPGRRSSDSTANASNNNASSRPGKMVSVPATVSSLVMDKSNNCGGESGTKRTTVKRNVGDVGSRSAASPRAQSPARVNGNVASAKVLGENQQHQQPSLSRNNSSRKAEQSPYRRNPLSEVDTNSKVQQNKPKIEAEAIQKPNGRVALEKKGVGVNCKTKEQHEEESSVPDSAVVKTTVVSSGVDNLKPQGLTRSRSSRRSRDLDINPEAVVNPTHSYASLLLEDIQNFHQKNTPPPPPPQQQQPSISLPACLTKACSILEAVADLNSTTSSNFSGACSEDRRSPSTQQSIRSEYNAQLGSNHYGKRMPQPGAKDPFVESEVAVSDDVMEPSLHKYVTVKRGGGVDMEDQESSGSNSFTVTSSGQHHWGTSCSSWEPNSADSTDCCTSRLSSREEGQKSTLALENSLSSEAKKCLNSKRRECDHEHSSGIGRGRLGSNKGLNTLPVVTAAATT 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2804 681 MobiDBLite consensus disorder prediction 1 35 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 409 439 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 572 591 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 295 359 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 209 232 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 233 288 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 81 128 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 577 591 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 1 375 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 642 681 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 157 202 - -
Ssu6g2804 681 PANTHER OS02G0734667 PROTEIN 1 678 - -
Ssu6g2804 681 PANTHER OS02G0734667 PROTEIN 1 678 IPR040412 -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 39 80 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 498 518 - -
Ssu6g2804 681 MobiDBLite consensus disorder prediction 642 658 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2804 Ssu-Chr6 65119457 65121772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2804 - - gmx:100805280 873.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2804 6 65119457 65121772 Ssu6g2804 6 65119457 65121772 ECH
Ssu9g1360 9 48093986 48096242 Ssu6g2804 6 65119457 65121772 PCT